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Showing 30 materials out of 844

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Using Large Language Models for Biodata Exploration: From Theory to Practice

• beginner
machine learning mark ibberson group training
theislab/single-cell-tutorial

RNA-Seq Single-cell sequencing Transcriptomics Python RNA-seq
RockefellerUniversity/RU_VisualizingGenomicsData

Data visualisation Genomics Data visualization R
opensciency/sprint-content

Data management FAIR data
bioinformatics-core-shared-training/SingleCell_RNASeq_Jan23

Sequencing RNA-Seq Single-cell sequencing Transcriptomics R Next generation sequencing RNA-seq
Computer Software, workflow

How to use V-pipe (SARS-CoV-2 data)

• beginner
Virology Genetic variation Workflows Variant calling Alignment Read pre-processing coronavirus NGS bioinformatics Variant-calling
Course design: Considerations for trainers – a Professional Guide

Curriculum development, course design, learning outcomes, Bloom's Taxonomy, assessment, course evaluation, training trainers, training material
Training materials

Using bioinformatics to hunt SARS-CoV-2, its variants & its origins – a practical guide

• beginner
Bioinformatics for schools, basic bioinformatics, SARS-CoV-2 pandemic, genome analysis, protein sequence analysis, protein structure analysis, virus variants, spike protein, training material
ncl-icbam/ismb-tutorial-2023

Sequencing Transcriptomics Next generation sequencing Spatial transcriptomics
IFB-ElixirFr/EBAII

ChIP-seq Sequencing RNA-Seq Variant pattern analysis R Unix/Linux Next generation sequencing RNA-seq Variant analysis
IFB Shiny training

•• intermediate
R-programming Reproducible Science
RockefellerUniversity/RU_tidyverse_core

R script R
SalvatoreRa/tutorial

Machine learning General
AlexsLemonade/training-modules

RNA-Seq Single-cell sequencing Transcriptomics Pathway or network General R RNA-seq Pathways and Networks
Biology-informed Multiomics Data Integration and Visualization

• beginner
e-learning

BLAST and multiple sequence alignment (MSA) programs

• beginner
Sequence analysis Blast Multiple sequence alignment
Docker and Singularity for Reproducible Research: Getting Started with Containers

• beginner
reproducibility container data management data security high-performance computing
BLAST and multiple sequence alignment (MSA) programs

• beginner
Blast E learning Multiple sequence alignment
hadley/r4ds

R script Quarto R Data science
jeroenjanssens/data-science-at-the-command-line

Unix/Linux
WCSCourses/SARS-COV-2_B4B

Genomics Variant pattern analysis Unix/Linux Variant analysis
bioinformaticsdotca/MET_2023

Metabolomics
e-learning

UNIX Fundamentals

• beginner
Computer science Problem based learning Programming Unix
Tutorial, Slideshow, e-learning

High Performance Computing (HPC) in Life Sciences

• beginner
Computer science Bioinformatics Biology High performance computing high-performance computing
e-learning

neXtProt : Exploring human proteins

• beginner
Proteins Proteomics Human biology
e-learning

ISMARA: A tool to infer genome-wide regulatory interactions

• beginner
Systems biology Gene regulation Transcription factors and regulatory sites Computational modelling
tidyverse/datascience-box

R script R Data science
e-learning

Cellosaurus : A resource on cell lines

• beginner
Biosciences Experimental design and studies basic research Reproducibility cell line
Vital-IT Infrastructure Usage
e-learning

Explore and Visualize Your Data with Python

•• intermediate
Data visualisation Bioinformatics Python Data analysis

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Training coordinator

Using Large Language Models for Biodata Exploration: From Theory to Practice

theislab/single-cell-tutorial

RockefellerUniversity/RU_VisualizingGenomicsData

opensciency/sprint-content

bioinformatics-core-shared-training/SingleCell_RNASeq_Jan23

How to use V-pipe (SARS-CoV-2 data)

Course design: Considerations for trainers – a Professional Guide

Using bioinformatics to hunt SARS-CoV-2, its variants & its origins – a practical guide

ncl-icbam/ismb-tutorial-2023

IFB-ElixirFr/EBAII

IFB Shiny training

RockefellerUniversity/RU_tidyverse_core

SalvatoreRa/tutorial

AlexsLemonade/training-modules

Biology-informed Multiomics Data Integration and Visualization

BLAST and multiple sequence alignment (MSA) programs

Docker and Singularity for Reproducible Research: Getting Started with Containers

BLAST and multiple sequence alignment (MSA) programs

hadley/r4ds

jeroenjanssens/data-science-at-the-command-line

WCSCourses/SARS-COV-2_B4B

bioinformaticsdotca/MET_2023

UNIX Fundamentals

High Performance Computing (HPC) in Life Sciences

neXtProt : Exploring human proteins

ISMARA: A tool to infer genome-wide regulatory interactions

tidyverse/datascience-box

Cellosaurus : A resource on cell lines

Vital-IT Infrastructure Usage

Explore and Visualize Your Data with Python

Interactive Visualization with Python

Introduction to Machine Learning with Python

When immunology meets bioinformatics

Data Analysis and Representation in Python

Diving into deep learning - theory and applications with PyTorch

First Steps with Python in Life Sciences

Ensuring More Accurate, Generalisable, and Interpretable Machine Learning Models for Bioinformatics

NGS - Quality Control, Alignment, Visualisation

Enrichment Analysis

Docker and Singularity for Reproducible Research: Getting Started with Containers

Snakemake for Reproducible Research: Getting Started with Workflows

Biodiversity bioinformatics: from large-scale phylogenomics to gene families and functions

NGS - Genome Variant Analysis

Make your research FAIRer with Quarto, GitHub and Zenodo

UNIX Shell Scripting in Life Sciences

Version Control with Git

Introduction to bulk RNA-Seq: From Quality Control to Pathway Analysis

First Steps with R in Life Sciences

Federated Learning in Bioinformatics

Introduction to Sequencing Data Analysis

Federated Learning in Bioinformatics

Reproducible and Scalable Research with Snakemake and Software Containers

Optimizing Python Code for Better Performance

Introduction to High-performance Computing (sciCORE Cluster)

Summer School Machine Learning and AI

Best Practices for Investigating Gene Expression Differences by Biological Sex

R-packaging

Advanced Statistics: Statistical Modelling

First Steps with UNIX in Life Sciences

Single-Cell Transcriptomics with R

SIB Swiss Institute of Bioinformatics

Glittr.org

BY-COVID