Welcome to TeSS: ELIXIR's Training Portal

Browsing, discovering and organising life sciences training resources, aggregated from ELIXIR nodes and 3rd-party providers.

Latest Content in TeSS

Introduction to Unix for Bioinformatics

This course offers an introduction to working with Linux. We will describe the Linux environment so that participants can start to utilize command-line tools and feel comfortable using a text-based way of interacting with a computer. We will take a problem-solving approach, drawing on types of...

Added to TeSS today
Introduction to Statistical Analysis

This course provides a refresher on the foundations of statistical analysis. Practicals are conducted using the ‘Shiny’ package; which provides an accessible interface to the R statistical language. Note that this is not a course for learning about the R statistical language itself. If you wish...

Added to TeSS today
Introduction to identifying and characterising variants from NGS data

This course covers state-of-the-art and best-practice tools for the analysis of genomes. We describe, and give hands-on experience of, the entire analysis workflow from raw data generated by a sequencing machine to deriving variant calls (e.g. Single Nucleotide Variants) that are ready for...

Added to TeSS today
Best practices in Research Data Management for Biological Sciences

As a researcher, you will encounter research data in many forms, ranging from measurements, numbers and images to documents and publications. Whether you create, receive or collect data, you will certainly need to organise it at some stage of your project. This workshop will provide an overview...

Added to TeSS today
Software Carpentry - ResBaz Brisbane (Python)

Find out more at https://bio-swc-bne.github.io/2018-06-06-ResbazBris-Python/

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Community analysis of amplicon sequencing data (16S rRNA)

This course introduces community analysis of amplicon sequencing data (16S rRNA). It covers preprocessing, taxonomic classification, and statistical analysis for marker gene studies. The user-friendly Chipster software is used in the exercises, so no Unix or R experience is required and the...

Added to TeSS today
Virus detection using small RNA-seq

This course introduces the VirusDetect pipeline covering all the analysis steps and file formats. VirusDetect allows you to detect known viruses and identify news ones by sequencing small RNAs (siRNA) in host samples. siRNA sequences are assembled to contigs and compared to known virus sequences....

Scientific topics: RNA-Seq

Added to TeSS today
Single cell RNA-seq data analysis

This course introduces single cell RNA-seq data analysis methods, tools and file formats. It covers the preprocessing steps of DropSeq data from raw reads to a digital gene expression matrix (DGE), and how to find sub-populations of cells using clustering with the Seurat tools. The user-friendly...

Added to TeSS today
RNA-seq data analysis

This course introduces RNA-seq data analysis methods, tools and file formats. It covers all the steps from quality control and alignment to quantification and differential expression analysis, and also experimental design is discussed. The user-friendly Chipster software is used in the exercises,...

Scientific topics: RNA-Seq

Added to TeSS today
Python for ecologists: Glossary

the SciPy ecosystem for python provides the tools necessary for scientific computing Jupyter Notebook and the Spyder IDE are great tools to code in and interact with python with its large community it is easy to find help in the internet The data, aes variables and a geometry are the main...

Added to TeSS 11 days ago