SIB Swiss Institute of Bioinformatics

View home page

Materials (105)
Events (26)

Showing 30 materials out of 105

View all & filter

e-learning

Data Repositories for Bioinformatics

• beginner
Data management Online Repository Data reuse Data mining FAIR Data
Using Large Language Models for Biodata Exploration: From Theory to Practice

• beginner
machine learning mark ibberson group training
Computer Software, workflow

How to use V-pipe (SARS-CoV-2 data)

• beginner
Virology Genetic variation Workflows Variant calling Alignment Read pre-processing coronavirus NGS bioinformatics Variant-calling
Training materials

Using bioinformatics to hunt SARS-CoV-2, its variants & its origins – a practical guide

• beginner
Bioinformatics for schools, basic bioinformatics, SARS-CoV-2 pandemic, genome analysis, protein sequence analysis, protein structure analysis, virus variants, spike protein, training material
e-learning

BLAST and multiple sequence alignment (MSA) programs

• beginner
Sequence analysis Blast Multiple sequence alignment
BLAST and multiple sequence alignment (MSA) programs

• beginner
Blast E learning Multiple sequence alignment
e-learning

UNIX Fundamentals

• beginner
Computer science Problem based learning Programming Unix
Tutorial, Slideshow, e-learning

High Performance Computing (HPC) in Life Sciences

• beginner
Computer science Bioinformatics Biology High performance computing high-performance computing
e-learning

neXtProt : Exploring human proteins

• beginner
Proteins Proteomics Human biology
e-learning

ISMARA: A tool to infer genome-wide regulatory interactions

• beginner
Systems biology Gene regulation Transcription factors and regulatory sites Computational modelling
e-learning

Cellosaurus : A resource on cell lines

• beginner
Biosciences Experimental design and studies basic research Reproducibility cell line
Vital-IT Infrastructure Usage
e-learning

Explore and Visualize Your Data with Python

•• intermediate
Data visualisation Bioinformatics Python Data analysis
Introduction to 3D-Structure Visualization and Homology Modeling using the Swiss-Model Workspace
Data Analysis and Representation in Python

•• intermediate
programming,data analysis,training,data visualisation,torsten schwede & thierry sengstag group,mark ibberson group programming,training,torsten schwede & thierry sengstag group,mark ibberson group
Docker and Singularity for Reproducible Research: Getting Started with Containers

• beginner
reproducibility container data management data security high-performance computing
When immunology meets bioinformatics

• beginner
R Basics Quiz

• beginner
Spatial Omics Data Analysis

•• intermediate
ViralZone

Phylogenetics of animal viral pathogens

• beginner
Animal pathogens E learning Phylogenetics
Video, E-learning

FAIR principles in practice for health data

• beginner
Computer science Data management FAIR data Medical informatics Standardisation and normalisation Design Clinical data RDF Knowledge graph Semantic framework …
ISMARA: A tool to infer genome-wide regulatory interactions
Querying SIB resources with SPARQL
SARS-CoV-2 : Studying a new virus
Diving into deep learning - theory and applications with PyTorch

•• intermediate
Cybersecurity Quiz for SIB employees only (internal use)
Getting Started With BioMedIT
BioMedIT: Information Security Awareness Training
Video, Training materials, E-learning

Validate Graph Data with SHACL

•• intermediate
Medical informatics FAIR data Data management Computer science Validation Data handling Clinical data SHACL Data validation RDF …
Introduction to FAIR Research Data Management & Data Management Plan

• beginner
training reproducibility data management data security open data mark ibberson group

Showing 26 events (also found 578 past events)

Filter events

Activity log

Content provider

Type

ELIXIR node

Owner

Editors

Data Repositories for Bioinformatics

Using Large Language Models for Biodata Exploration: From Theory to Practice

How to use V-pipe (SARS-CoV-2 data)

Using bioinformatics to hunt SARS-CoV-2, its variants & its origins – a practical guide

BLAST and multiple sequence alignment (MSA) programs

BLAST and multiple sequence alignment (MSA) programs

UNIX Fundamentals

High Performance Computing (HPC) in Life Sciences

neXtProt : Exploring human proteins

ISMARA: A tool to infer genome-wide regulatory interactions

Cellosaurus : A resource on cell lines

Vital-IT Infrastructure Usage

Explore and Visualize Your Data with Python

Introduction to 3D-Structure Visualization and Homology Modeling using the Swiss-Model Workspace

Data Analysis and Representation in Python

Docker and Singularity for Reproducible Research: Getting Started with Containers

When immunology meets bioinformatics

R Basics Quiz

Spatial Omics Data Analysis

Phylogenetics of animal viral pathogens

FAIR principles in practice for health data

ISMARA: A tool to infer genome-wide regulatory interactions

Querying SIB resources with SPARQL

SARS-CoV-2 : Studying a new virus

Diving into deep learning - theory and applications with PyTorch

Cybersecurity Quiz for SIB employees only (internal use)

Getting Started With BioMedIT

BioMedIT: Information Security Awareness Training

Validate Graph Data with SHACL

Introduction to FAIR Research Data Management &amp; Data Management Plan

Docker and Singularity for Reproducible Research: Getting Started with Containers

Reproducible and Scalable Research with Snakemake and Software Containers

Snakemake for Reproducible Research: Getting Started with Workflows

First Steps with R in Life Sciences

Introduction to NGS ATAC-seq data analysis

Introduction to NGS ATAC-seq data analysis

When immunology meets bioinformatics

Best Practices for Investigating Gene Expression Differences by Biological Sex

Version Control with Git

UNIX Shell Scripting in Life Sciences

Data Analysis and Representation in Python

Data Analysis and Representation in Python

Optimizing Python Code for Better Performance

Single-Cell Transcriptomics with R

Single-Cell Transcriptomics with R

Ensuring More Accurate, Generalisable, and Interpretable Machine Learning Models for Bioinformatics

Interactive Visualization with Python

NGS - Quality Control, Alignment, Visualisation

Introduction to Sequencing Data Analysis

ELIXIR-GOBLET Train-the-Trainer

Enrichment Analysis

Diving into deep learning - theory and applications with PyTorch

Introduction to High-performance Computing (sciCORE Cluster)

Introduction to Sequencing-based Spatial Transcriptomics Data Analysis

Cancer Variant Analysis

Data Visualisation with R

Introduction to FAIR Research Data Management & Data Management Plan