SIB Swiss Institute of Bioinformatics

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Introduction to Viral Bioinformatics

• beginner
genes and genomes infectious disease medicine and health services and resources training
Computer Software, workflow

How to use V-pipe (SARS-CoV-2 data)

• beginner
Virology Genetic variation Workflows Variant calling Alignment Read pre-processing coronavirus NGS bioinformatics Variant-calling
Training materials

Using bioinformatics to hunt SARS-CoV-2, its variants & its origins – a practical guide

• beginner
Bioinformatics for schools, basic bioinformatics, SARS-CoV-2 pandemic, genome analysis, protein sequence analysis, protein structure analysis, virus variants, spike protein, training material
e-learning

BLAST and multiple sequence alignment (MSA) programs

• beginner
Sequence analysis Blast Multiple sequence alignment
BLAST and multiple sequence alignment (MSA) programs

• beginner
Blast E learning Multiple sequence alignment
e-learning

UNIX Fundamentals

• beginner
Computer science Problem based learning Programming Unix
Tutorial, Slideshow, e-learning

High Performance Computing (HPC) in Life Sciences

• beginner
Computer science Bioinformatics Biology High performance computing high-performance computing
e-learning

ISMARA: A tool to infer genome-wide regulatory interactions

• beginner
Systems biology Gene regulation Transcription factors and regulatory sites Computational modelling
e-learning

Cellosaurus : A resource on cell lines

• beginner
Biosciences Experimental design and studies basic research Reproducibility cell line
e-learning

neXtProt : Exploring human proteins

• beginner
Proteins Proteomics Proteins (proteins) human
Vital-IT Infrastructure Usage
e-learning

Explore and Visualize Your Data with Python

•• intermediate
Data visualisation Bioinformatics Python Data analysis
Introduction to 3D-Structure Visualization and Homology Modeling using the Swiss-Model Workspace
Cancer Variant Analysis

•• intermediate
R Basics Quiz

• beginner
Introduction to Machine Learning with Python

• beginner
data mining,machine learning,training,mark ibberson group,torsten schwede & thierry sengstag group data mining,machine learning,training,torsten schwede & thierry sengstag group,mark ibberson group
Introduction to FAIR Research Data Management & Data Management Plan

• beginner
training reproducibility data management data security open data mark ibberson group
ViralZone

Phylogenetics of animal viral pathogens

• beginner
Animal pathogens E learning Phylogenetics
Introduction to Bayesian Statistics with R

•• intermediate
biostatistics training
Discover ViralZone

• beginner
genes and genomes infectious disease medicine and health services and resources training alan bridge group
Deep Learning for Life Sciences - fundamentals and applications

• beginner
training data mining machine learning programming artificial intelligence prediction
Gene Expression made Useful Easily: Tools and Database of Bgee

• beginner
Bgee genes and genomes evolution and phylogeny services and resources comparative genomics database curation data management data visualisation transcriptomics training …
First Steps with SQL for Data Science

• beginner
SQL programming
Single-Cell Transcriptomics with R

•• intermediate
genes and genomes biochemistry biomarkers experimental biology functional genomics next generation sequencing population genomics single-cell biology training transcriptomics …
Using ASAP for Single-Cell Analysis

• beginner
genes and genomes biomarkers experimental biology functional genomics next generation sequencing population genomics single-cell biology training transcriptomics bart deplancke group
Make your research FAIRer with Quarto, GitHub and Zenodo

• beginner
FAIR data management reproducible research
Video, E-learning

FAIR principles in practice for health data

• beginner
Computer science Data management FAIR data Medical informatics Standardisation and normalisation Design Clinical data RDF Knowledge graph Semantic framework …
neXtProt : Exploring human proteins
ISMARA: A tool to infer genome-wide regulatory interactions
Querying SIB resources with SPARQL

Showing 30 events out of 54 (also found 540 past events)

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Introduction to Viral Bioinformatics

How to use V-pipe (SARS-CoV-2 data)

Using bioinformatics to hunt SARS-CoV-2, its variants & its origins – a practical guide

BLAST and multiple sequence alignment (MSA) programs

BLAST and multiple sequence alignment (MSA) programs

UNIX Fundamentals

High Performance Computing (HPC) in Life Sciences

ISMARA: A tool to infer genome-wide regulatory interactions

Cellosaurus : A resource on cell lines

neXtProt : Exploring human proteins

Vital-IT Infrastructure Usage

Explore and Visualize Your Data with Python

Introduction to 3D-Structure Visualization and Homology Modeling using the Swiss-Model Workspace

Cancer Variant Analysis

R Basics Quiz

Introduction to Machine Learning with Python

Introduction to FAIR Research Data Management &amp; Data Management Plan

Phylogenetics of animal viral pathogens

Introduction to Bayesian Statistics with R

Discover ViralZone

Deep Learning for Life Sciences - fundamentals and applications

Gene Expression made Useful Easily: Tools and Database of Bgee

First Steps with SQL for Data Science

Single-Cell Transcriptomics with R

Using ASAP for Single-Cell Analysis

Make your research FAIRer with Quarto, GitHub and Zenodo

FAIR principles in practice for health data

neXtProt : Exploring human proteins

ISMARA: A tool to infer genome-wide regulatory interactions

Querying SIB resources with SPARQL

Introduction to Bayesian Statistics with R

Introduction to High-performance Computing (sciCORE Cluster)

Introduction to Metagenomics Data Analysis of Microbial Communities

Gene Expression made Useful Easily: Tools and Database of Bgee

Using Large Language Models for Biodata Exploration: From Theory to Practice

First Steps in Parallelization with OpenMP

Missing Data and Imputation Methods

Introduction to Machine Learning with Python

Docker and Singularity for Reproducible Research: Getting Started with Containers

Best Practices in High-Perfomance Computing (sciCORE cluster)

Docker and Singularity for Reproducible Research: Getting Started with Containers

Reproducible and Scalable Research with Snakemake and Software Containers

Reproducible and Scalable Research with Snakemake and Software Containers

Snakemake for Reproducible Research: Getting Started with Workflows

UniProt: Focus on Plant Proteins

Submitting, Finding and Downloading Raw Sequencing Data with ENA

SIB PhD Training Network Retreat: Training Network Alumni Career

Biology-informed Multiomics Data Integration and Visualization

Causal Inference

Best Practices in Programming

Single-Cell Transcriptomics with R

Make your research FAIRer with Quarto, GitHub and Zenodo

Summer School Machine Learning and AI

Biodiversity bioinformatics: from large-scale phylogenomics to gene families and functions

R-packaging

Federated Learning in Bioinformatics

Advanced Statistics: Statistical Modelling

First Steps with UNIX in Life Sciences

NGS - Genome Variant Analysis

Federated Learning in Bioinformatics

Introduction to FAIR Research Data Management & Data Management Plan