-
Introduction to Viral Bioinformatics
• beginnergenes and genomes infectious disease medicine and health services and resources training -
Computer Software, workflow
How to use V-pipe (SARS-CoV-2 data)
• beginnerVirology Genetic variation Workflows Variant calling Alignment Read pre-processing coronavirus NGS bioinformatics Variant-calling -
Training materials
Using bioinformatics to hunt SARS-CoV-2, its variants & its origins – a practical guide
• beginnerBioinformatics for schools, basic bioinformatics, SARS-CoV-2 pandemic, genome analysis, protein sequence analysis, protein structure analysis, virus variants, spike protein, training material -
e-learning
BLAST and multiple sequence alignment (MSA) programs
• beginnerSequence analysis Blast Multiple sequence alignment -
BLAST and multiple sequence alignment (MSA) programs
• beginnerBlast E learning Multiple sequence alignment -
e-learning
UNIX Fundamentals
• beginnerComputer science Problem based learning Programming Unix -
Tutorial, Slideshow, e-learning
High Performance Computing (HPC) in Life Sciences
• beginnerComputer science Bioinformatics Biology High performance computing high-performance computing -
e-learning
ISMARA: A tool to infer genome-wide regulatory interactions
• beginnerSystems biology Gene regulation Transcription factors and regulatory sites Computational modelling -
e-learning
Cellosaurus : A resource on cell lines
• beginnerBiosciences Experimental design and studies basic research Reproducibility cell line -
e-learning
neXtProt : Exploring human proteins
• beginnerProteins Proteomics Proteins (proteins) human -
Version Control with Git
• beginnerprogramming,reproducibility,data management programming,reproducibility,data management,training -
Vital-IT Infrastructure Usage
-
e-learning
Explore and Visualize Your Data with Python
•• intermediateData visualisation Bioinformatics Python Data analysis -
Introduction to 3D-Structure Visualization and Homology Modeling using the Swiss-Model Workspace
-
Cancer Variant Analysis
•• intermediate -
Introduction to Large Language Models for Life Scientists
• beginnermachine learning mark ibberson group training -
R Basics Quiz
• beginner -
Diving into deep learning - theory and applications with PyTorch
•• intermediate -
First Steps with R in Life Sciences
• beginnertraining,biostatistics,data visualisation,programming,mark ibberson group training,biostatistics,data visualisation,programming,torsten schwede & thierry sengstag group -
First Steps with Python in Life Sciences
• beginnerdata management data visualisation programming reproducibility training torsten schwede & thierry sengstag group mark ibberson group -
Single-Cell Transcriptomics with R
•• intermediategenes and genomes biochemistry biomarkers experimental biology functional genomics next generation sequencing population genomics single-cell biology training transcriptomics … -
ViralZone
Phylogenetics of animal viral pathogens
• beginnerAnimal pathogens E learning Phylogenetics -
Introduction to Bayesian Statistics with R
•• intermediatebiostatistics training -
Discover ViralZone
• beginnergenes and genomes infectious disease medicine and health services and resources training alan bridge group -
NGS - Quality Control, Alignment, Visualisation
• beginnertraining genes and genomes next generation sequencing environmental science medicine and health -
Video, E-learning
FAIR principles in practice for health data
• beginnerComputer science Data management FAIR data Medical informatics Standardisation and normalisation Design Clinical data RDF Knowledge graph Semantic framework … -
neXtProt : Exploring human proteins
-
ISMARA: A tool to infer genome-wide regulatory interactions
-
Querying SIB resources with SPARQL
-
SARS-CoV-2 : Studying a new virus
Activity log