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PhenoMeNal: accessing metabolomics workflows in Galaxy
• beginnerMetabolomics Chemical biology Galaxy -
Video
A common framework for designing portable federated pipelines
•• intermediateData architecture, analysis and design data access federated data analysis -
Installation instructions, Manual
How to use Common Workflow Language
• beginnerWorkflows commonwl common workflow language CWL eLearning EeLP -
Recorded webinar, Slidedeck
Europe PMC API workshop: Part two
API Literature search Literature database search Europe PMC Annotations
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Online material, Recording, hands-on tutorial
MaBoSS: a tool for modelling biological systems
• beginnerMathematical modelling cancer Signalling boolean modelling logical modelling -
Recorded webinar
Exploring metabolite metabolism using the Enzyme Portal
Enzymes Metabolomics
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Training materials, Video
GA4GH Passports and ELIXIR AAI
•• intermediateAAI GA4GH Passports Auhtorisation -
Video
Status Update Code of Conduct: Teaming up & Talking about it
•• intermediateGDPR Healthcare research data harmonization -
Webinar
EBI Metagenomics: analysing and exploring metagenomics data
Metagenomics MGnify Sequence Analysis Microbiology
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e-learning
2024 highlights: A year of on-demand training
Bioinformatics Introduction
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Video
Useful ontologies for harmonizing cohort data
• beginnerData integration and warehousing Data management Ontology and terminology Ontologies Cohort data data annotation -
Video
Applying data standards to the harmonization of COVID-19 datasets from different sources
• beginnerData integration and warehousing Data integration Standards Standardised vocabulary data harmonization Ontologies -
Video
Annotating data using next generation biobanking ontology (NGBO)
• beginnerData integration and warehousing Ontology and terminology Standards Ontologies Data Integration data harmonization Standardised vocabulary -
Video
FAIR software tools
• beginnerSoftware engineering FAIR software tools Software -
Video
Making cohort data FAIR
• beginnerData integration and warehousing Data management FAIR data Cohort data Ontologies Standards -
Video
Introduction to FAIR principles - Open science through FAIR health data networks: dream or reality?
• beginnerData management FAIR data Health data Open science -
Video
Data Gravity in the Life Sciences: Lessons learned from the HCA and other federated data projects
•• intermediateData architecture, analysis and design Cloud computing Data analysis Standards Translational research -
Series of videos
CINECA discovery service catalog
•• intermediateCohort data Standards federated data analysis Beacon queries -
Tutorial
MGnify quick tour
Metagenomics Sequence analysis MGnify Microbiology
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e-learning
Structural volume data
Electron microscopy Protein structure analysis Structural biology Structural bioinformatics Segmentation Volume matching
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e-learning
Metabolomics: An introduction
Metabolomics Small molecules Metabolites Metabolome
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Recorded webinar
Open with purpose: How and why to make your data open
Data management Data curation and archival
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Life Sciences Literature Database
Finding the data behind research publications with Europe PMC
Biomedical Literature Data links databases External links
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Life Sciences Literature Database
Discovering scientific evidence using Europe PMC SciLite annotation
Biomedical Literature Annotations Literature search SciLite Protein structure viewer Chemical viewer
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Recorded webinar
Data visualisation at PDBe
Protein structure analysis
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Course materials
Proteomics bioinformatics
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Recorded webinar
How to share text mining results in biology
Natural language processing Literature and language
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Course materials
Managing a Bioinformatics Core Facility: CABANA Virtual Workshop Handbook
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Recorded webinar
Annotate your proteins with the UniProt Functional Annotation system UniFire
Proteins Function analysis
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Webinar
Preprint discovery 101: Tips & tricks for authors and readers
Europe PMC, Preprints
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CINECA PROJECT
CINECA’s aim is to deliver a federated infrastructure for data discovery and sharing of human genetic and phenotypic data for research that is interoperable across continents. CINECA [Common Infrastructure for National Cohorts in Europe, Canada and Africa] is funded by the European Union Horizon...
17 training materials0 events (3 past events)CINECA PROJECT https://www.cineca-project.eu/ https://tess.elixir-europe.org/content_providers/cineca CINECA’s aim is to deliver a federated infrastructure for data discovery and sharing of human genetic and phenotypic data for research that is interoperable across continents. CINECA [Common Infrastructure for National Cohorts in Europe, Canada and Africa] is funded by the European Union Horizon 2020 programme and the Canadian Institutes of Health Research. /system/content_providers/images/000/000/140/original/CINECA_logo.png?1589875546 -
European Bioinformatics Institute (EBI)
EMBL-EBI provides freely available data from life science experiments, performs basic research in computational biology and offers an extensive user training programme, supporting researchers in academia and industry.
448 training materials27 events (1879 past events)European Bioinformatics Institute (EBI) http://www.ebi.ac.uk https://tess.elixir-europe.org/content_providers/european-bioinformatics-institute-ebi EMBL-EBI provides freely available data from life science experiments, performs basic research in computational biology and offers an extensive user training programme, supporting researchers in academia and industry. /system/content_providers/images/000/000/002/original/EBI_logo.png?1469458224
Activity log
EMBL-EBI