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PhenoMeNal: accessing metabolomics workflows in Galaxy
• beginnerMetabolomics Chemical biology Galaxy -
Recorded webinar, Slidedeck
Europe PMC API workshop: Part two
API Literature search Literature database search Europe PMC Annotations
-
Recorded webinar
Exploring metabolite metabolism using the Enzyme Portal
Enzymes Metabolomics
-
Webinar
EBI Metagenomics: analysing and exploring metagenomics data
Metagenomics MGnify Sequence Analysis Microbiology
-
e-learning
2024 highlights: A year of on-demand training
Bioinformatics Introduction
-
Tutorial
MGnify quick tour
Metagenomics Sequence analysis MGnify Microbiology
-
e-learning
Structural volume data
Electron microscopy Protein structure analysis Structural biology Structural bioinformatics Segmentation Volume matching
-
Recorded webinar
Discovering scientific evidence using Europe PMC SciLite annotation
-
Life Sciences Literature Database
Finding the data behind research publications with Europe PMC
Biomedical Literature Data links databases External links
-
Life Sciences Literature Database
Discovering scientific evidence using Europe PMC SciLite annotation
Biomedical Literature Annotations Literature search SciLite Protein structure viewer Chemical viewer
-
Course materials
Managing a Bioinformatics Core Facility: CABANA Virtual Workshop Handbook
-
Recorded webinar
Annotate your proteins with the UniProt Functional Annotation system UniFire
Proteins Function analysis
-
Webinar
Preprint discovery 101: Tips & tricks for authors and readers
Europe PMC, Preprints
-
e-learning
The International Mouse Phenotyping Consortium: Finding phenotypes for your gene of interest
Genotype and phenotype Model organisms Gene function Mouse models IMPC Mammalian Phenotype Ontology Mouse knockouts CRISPR
-
e-learning
Workflows: Combining tools for data analysis
Workflows Galaxy NextFlow SnakeMake EOSC-Life
-
Webinar
Integrating publications into bioinformatics analysis
Europe PMC REST API Bioinformatic analysis
-
e-learning
Methods in bioinformatics: Biological data analysis and interpretation
Networks
-
Course materials
Livestock genomics
-
Webinar
Europe PMC, programmatically
Literature search Programmatic Access Europe PMC REST API Biomedical Literature
-
Webinar
Text mining: Key concepts and applications
Literature search Text mining Europe PMC Biomedical Literature
-
e-learning
2022 highlights
Bioinformatics Introduction
-
Webinar
Effective Literature Research with Europe PMC
• beginnerEurope PMC Biomedical Literature Literature search -
Webinar
How to Share Text Mining Results in Biology
Europe PMC Text mining Literature search
-
e-learning
ResOps: Cloud-native tools and technology for researchers
Computer science Data architecture, analysis and design Software engineering
-
Recorded webinar
A guide to RNA families
RNA
-
Recorded webinar
A guide to identifying and prioritising drug targets with the Open Targets Platform
Drug discovery
-
e-learning
BioSamples: Quick tour
Data curation and archival Data management Metadata Reference samples Biological samples
-
e-learning
Enzyme Portal: Quick tour
Proteins Chemical biology Enzymes Biochemical pathways
-
Recorded webinar
Open FAIR data: the role of public data archives
Imaging
-
Recorded webinar
The BioImage Archive: Home for life sciences microscopy data
Bioimaging Imaging
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Workshops and courses
Concepts, methods, and resources in pangenomics
1 October - 12 November 2025
Online
Pangenomics Pangenome Genome Genome analysis -
Workshops and courses
UniProt
2 October 2025 - 7 May 2026
Online
Sequence analysis protein Function analysis Protein variants Annotation UniProt: The Universal Protein Resource -
Workshops and courses
Computational Biology Training in Hematology 2025, Module 2
22 - 25 October 2025
France
Face-to-face
-
Workshops and courses
Making sense of massive genomic data by indexing at scale
22 October 2025 @ 09:00 - 17:00
Online
Genome index Pangenomics -
Workshops and courses
Redefining UniProt reference proteomes and upcoming changes in UniProtKB
23 October 2025 @ 09:00 - 17:00
Online
Data reference Protein function prediction Data mining UniProt: The Universal Protein Resource protein proteome reference -
Workshops and courses
Structural bioinformatics
27 - 31 October 2025
Online
Structure analysis Protein folds and structural domains Structure prediction AlphaFold Database -
Workshops and courses
Pangenome graphs as a new paradigm in comparative genomics
5 November 2025 @ 09:00 - 17:00
Online
Genome visualisation Pangenomics Genome -
Workshops and courses
Pangenome annotations and resources in Ensembl
12 November 2025 @ 09:00 - 17:00
Online
Genome annotation Ensembl -
Workshops and courses
Chemicals in a biological context: metabolites, drugs, and beyond
13 November 2025 @ 09:00 - 17:00
Online
ChEMBL Protein Data Bank in Europe MetaboLights: Metabolomics repository and reference database -
Workshops and courses
Genome bioinformatics: from short- to long-read sequencing
17 - 21 November 2025
United Kingdom
Face-to-face
-
Workshops and courses
Managing a bioinformatics core facility
8 - 10 December 2025
United Kingdom
Face-to-face
Bioinformatics Budgeting Project management Team building Principal investigators Core facility services -
Workshops and courses
Single-cell RNA-seq analysis with Python
2 - 6 February 2026
Online
-
Workshops and courses
Introduction to RNA-seq and functional interpretation
9 - 13 February 2026
Online
RNA-Seq analysis Function analysis Gene expression profile RNA-Seq Transcriptome assembly Transcriptomics Gene transcripts -
Workshops and courses
Introduction to multi-omics data integration and visualisation
2 - 6 March 2026
United Kingdom
Face-to-face
FAIR data Multiomics Systems biology Multi-omics data integration Cosmos Omnipath Cytoscape -
Workshops and courses
Microscopy data analysis: machine learning and the BioImage Archive
16 - 20 March 2026
Online
Machine learning Bioimaging Image analysis Bioimage analysis Machine learning models Scientific computing Light microscopy Electron microscopy -
Workshops and courses
Data-driven approaches to understanding dementia
13 - 17 April 2026
United Kingdom
Face-to-face
Neurobiology Systems biology Machine learning Bioimaging -
Workshops and courses
Introduction to metabolomics analysis
27 April - 1 May 2026
United Kingdom
Face-to-face
MetaboLights: Metabolomics repository and reference database Galaxy for metabolomics MS Imaging Metabolite identification -
Workshops and courses
Systems biology: from large datasets to biological insight
11 - 15 May 2026
United Kingdom
Face-to-face
Systems biology Network analysis Machine learning Deep learning Network inference Logic modelling Multi-Omics Factor Analysis Data integration -
Workshops and courses
From sequences to structures: Protein characterisation using EMBL-EBI APIs
2 June 2026 @ 09:00 - 17:00
Online
Sequence alignment Protein sequence analysis Structure prediction Workflow format Job Dispatcher UniProt: The Universal Protein Resource InterPro Protein Data Bank in Europe AlphaFold Database Proteins -
Workshops and courses
Data science for life scientists
15 - 19 June 2026
United Kingdom
Face-to-face
Data science Python Data visualisation Statistics Machine learning -
Workshops and courses
Proteomics bioinformatics
6 - 10 July 2026
United Kingdom
Face-to-face
-
Workshops and courses
Bioinformatics for immunologists
13 - 17 July 2026
United Kingdom
Face-to-face
IntAct Molecular Interaction Database Reactome pathways database Ensembl Expression Atlas Gene expression (gene-expression) immunology transcriptomics analysis flow cytometry multiomics biological pathways immune receptor analysis -
Workshops and courses
Metagenomics bioinformatics at MGnify
14 - 18 September 2026
United Kingdom
Face-to-face
-
Workshops and courses
Causality in biomedicine: going beyond associations
4 - 9 October 2026
United Kingdom
Face-to-face
-
Workshops and courses
Structural bioinformatics
19 - 23 October 2026
Online
-
Workshops and courses
Genome bioinformatics: from short- to long-read sequencing
16 - 20 November 2026
United Kingdom
Face-to-face
-
Using the Ensembl Genome Browser
No date given
Face-to-face
HDRUK -
EBI - Joint EBI-Wellcome Trust Proteomics Bioinformatics workshop
No date given
Face-to-face
HDRUK -
FEBS: In Silico Systems Biology: Network Reconstruction, Analysis and Network-based Modelling
No date given
Face-to-face
HDRUK
Activity log
