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PhenoMeNal: accessing metabolomics workflows in Galaxy
• beginnerMetabolomics Chemical biology Galaxy -
e-learning
GWAS Catalog: Exploring SNP-trait associations
GWAS study GWAS Genome-wide association studies SNP-trait associations
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e-learning
ChEBI: Quick tour
Cheminformatics Chemical biology Chemical compounds Small molecules
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Recorded webinar, Slidedeck
Europe PMC API workshop: Part two
API Literature search Literature database search Europe PMC Annotations
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e-learning
A guide to...: Introducing concepts and resources in bioinformatics
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e-learning
Analysing and evaluating macromolecular models: Model quality assessment
Structural biology Structure analysis
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Course materials
Introduction to metabolomics analysis
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Recorded webinar
Exploring metabolite metabolism using the Enzyme Portal
Enzymes Metabolomics
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Course materials
AlphaFold Education Summit
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Webinar
EBI Metagenomics: analysing and exploring metagenomics data
Metagenomics MGnify Sequence Analysis Microbiology
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e-learning
2024 highlights: A year of on-demand training
Bioinformatics Introduction
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Tutorial
MGnify quick tour
Metagenomics Sequence analysis MGnify Microbiology
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Recorded webinar
The future of preprint peer review
Literature and language
-
e-learning
Structural volume data
Electron microscopy Protein structure analysis Structural biology Structural bioinformatics Segmentation Volume matching
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Recorded webinar
Discovering scientific evidence using Europe PMC SciLite annotation
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Recorded webinar
EurOPDX IT tools to support cancer research with patient-derived xenograft models
Oncology
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e-learning
PRIDE: Quick tour
Proteomics experiment Protein modifications Proteomics identifications ProteomeXchange Peptide identifications Post-translational modifications PTMs
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Course materials
Practical biocuration
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Recorded webinar
PsyArXiv preprints in Europe PMC
Literature and language
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Life Sciences Literature Database
Finding the data behind research publications with Europe PMC
Biomedical Literature Data links databases External links
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Life Sciences Literature Database
Discovering scientific evidence using Europe PMC SciLite annotation
Biomedical Literature Annotations Literature search SciLite Protein structure viewer Chemical viewer
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Recorded webinar
EurOPDX Data Portal: a repository of patient-derived xenograft models
Drug discovery
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Recorded webinar
MGnify API: accessing microbiome data computationally
Microbial ecology
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e-learning
Bioinformatics for the terrified: An introduction to the science of bioinformatics
Bioinformatics Ontology and terminology Introduction Databases Metadata Controlled vocabularies Beginners New to bioinformatics field Basic
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Recorded webinar
BioStudies database: aggregating all outputs of a life sciences study
Literature and language Experimental design and studies
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Recorded webinar
Genomic features that regulate gene expression, with Ensembl
Gene expression Epigenetics Epigenomics
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e-learning
Functional genomics II: Common technologies and data analysis methods
Functional genomics Gene expression RNA-Seq Microarray experiment Genotype and phenotype Next-generation sequencing NGS Real-time PCR Microarray Epigenetic modifications …
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Recorded webinar
Ethics/ELSI considerations - From FAIR to fair data sharing
Data governance
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Recorded webinar
Mol*: Improved molecular visualisation at PDBe
Protein structure analysis Structure analysis
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Recorded webinar
UniProtKB: Increasing our understanding of neurodegenerative disorders through data curation
Neurobiology Function analysis Data curation and archival
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Workshops and courses
Introduction to pangenomes and why they are worth exploring
1 October 2025 @ 09:00 - 17:00
Online
Genomics Pangenomics Genome -
Workshops and courses
Concepts, methods, and resources in pangenomics
1 October - 12 November 2025
Online
Pangenomics Pangenome Genome Genome analysis -
Workshops and courses
UniProt
2 October 2025 - 7 May 2026
Online
protein Function analysis Protein variants Annotation Sequence analysis UniProt: The Universal Protein Resource -
Workshops and courses
A guide to UniProt for students
2 October 2025 @ 09:00 - 17:00
Online
protein Protein sequence Protein function prediction Protein structure UniProt: The Universal Protein Resource proteins -
Workshops and courses
Metagenomics bioinformatics at MGnify
6 - 10 October 2025
United Kingdom
Face-to-face
Metagenomics Metagenomic sequencing Database search Strain resolution Functional analysis Metagenome-Assembled Genome (MAG) -
Workshops and courses
Evolution of the accessory genome
8 October 2025 @ 09:00 - 17:00
Online
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Workshops and courses
Inferring bacterial pangenomes with gene-based approaches
15 October 2025 @ 09:00 - 17:00
Online
Genome analysis Microbiology Pangenome Genome Bacteria -
Workshops and courses
Making sense of massive genomic data by indexing at scale
22 October 2025 @ 09:00 - 17:00
Online
Genome index Pangenomics -
Workshops and courses
Computational Biology Training in Hematology 2025, Module 2
22 - 25 October 2025
France
Face-to-face
-
Workshops and courses
Structural bioinformatics
27 - 31 October 2025
Online
Structure analysis Protein folds and structural domains Structure prediction AlphaFold Database -
Workshops and courses
Pangenome graphs as a new paradigm in comparative genomics
5 November 2025 @ 09:00 - 17:00
Online
Genome visualisation Pangenomics Genome -
Workshops and courses
Pangenome annotations and resources in Ensembl
12 November 2025 @ 09:00 - 17:00
Online
Genome annotation Ensembl -
Workshops and courses
Chemicals in a biological context: metabolites, drugs, and beyond
13 November 2025 @ 09:00 - 17:00
Online
ChEMBL Protein Data Bank in Europe MetaboLights: Metabolomics repository and reference database -
Workshops and courses
Genome bioinformatics: from short- to long-read sequencing
17 - 21 November 2025
United Kingdom
Face-to-face
-
Workshops and courses
Managing a bioinformatics core facility
8 - 10 December 2025
United Kingdom
Face-to-face
Bioinformatics Budgeting Project management Team building Principal investigators Core facility services -
Workshops and courses
Single-cell RNA-seq analysis with Python
2 - 6 February 2026
Online
-
Workshops and courses
Introduction to RNA-seq and functional interpretation
9 - 13 February 2026
Online
RNA-Seq analysis Function analysis Gene expression profile RNA-Seq Transcriptome assembly Transcriptomics Gene transcripts -
Workshops and courses
Introduction to multi-omics data integration and visualisation
2 - 6 March 2026
United Kingdom
Face-to-face
FAIR data Multiomics Systems biology Multi-omics data integration Cosmos Omnipath Cytoscape -
Workshops and courses
Microscopy data analysis: machine learning and the BioImage Archive
16 - 20 March 2026
Online
Machine learning Bioimaging Image analysis Bioimage analysis Machine learning models Scientific computing Light microscopy Electron microscopy -
Workshops and courses
Data-driven approaches to understanding dementia
13 - 17 April 2026
United Kingdom
Face-to-face
Neurobiology Systems biology Machine learning Bioimaging -
Workshops and courses
Introduction to metabolomics analysis
27 April - 1 May 2026
United Kingdom
Face-to-face
MetaboLights: Metabolomics repository and reference database Galaxy for metabolomics MS Imaging Metabolite identification -
Workshops and courses
Systems biology: from large datasets to biological insight
11 - 15 May 2026
United Kingdom
Face-to-face
Systems biology Network analysis Machine learning Deep learning Network inference Logic modelling Multi-Omics Factor Analysis Data integration -
Workshops and courses
From sequences to structures: Protein characterisation using EMBL-EBI APIs
2 June 2026 @ 09:00 - 17:00
Online
Sequence alignment Protein sequence analysis Structure prediction Workflow format Job Dispatcher UniProt: The Universal Protein Resource InterPro Protein Data Bank in Europe AlphaFold Database Proteins -
Workshops and courses
Data science for life scientists
15 - 19 June 2026
United Kingdom
Face-to-face
Data science Python Data visualisation Statistics Machine learning -
Workshops and courses
Proteomics bioinformatics
6 - 10 July 2026
United Kingdom
Face-to-face
-
Workshops and courses
Bioinformatics for immunologists
13 - 17 July 2026
United Kingdom
Face-to-face
IntAct Molecular Interaction Database Reactome pathways database Ensembl Expression Atlas Gene expression (gene-expression) immunology transcriptomics analysis flow cytometry multiomics biological pathways immune receptor analysis -
Workshops and courses
Metagenomics bioinformatics at MGnify
14 - 18 September 2026
United Kingdom
Face-to-face
-
Workshops and courses
Causality in biomedicine: going beyond associations
4 - 9 October 2026
United Kingdom
Face-to-face
-
Workshops and courses
Structural bioinformatics
19 - 23 October 2026
Online
-
Workshops and courses
Genome bioinformatics: from short- to long-read sequencing
16 - 20 November 2026
United Kingdom
Face-to-face
Activity log
