Training materials
Target audience: Students
and Authors: Clemens Blank or Dave Clements or John Chilton or Saskia Lawson-Tovey or Thomas Duigou or erasche or nekrut
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hands-on tutorial
16S Microbial Analysis with mothur (extended)
• beginnerMetagenomics Microbial ecology Taxonomy Sequence analysis 16S Microbiome metabarcoding microgalaxy -
hands-on tutorial
16S Microbial Analysis with mothur (short)
• beginnerMetagenomics Microbial ecology Taxonomy Sequence analysis 16S Microbiome metabarcoding microgalaxy -
slides
Introduction to Galaxy
• beginnerIntroduction to Galaxy Analyses -
hands-on tutorial
Evaluating and ranking a set of pathways based on multiple metrics
• beginnerSynthetic biology Synthetic Biology -
hands-on tutorial
From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis
• beginnerGenetic variation Variant Analysis covid19 one-health virology -
hands-on tutorial
Generating theoretical possible pathways for the production of Lycopene in E.Coli using Retrosynthesis tools
• beginnerSynthetic biology Synthetic Biology -
hands-on tutorial
Designing plasmids encoding predicted pathways by using the BASIC assembly method
• beginnerSynthetic biology Synthetic Biology -
hands-on tutorial
Reference-based RNA-Seq data analysis
• beginnerTranscriptomics QC bulk collections cyoa drosophila rna-seq -
hands-on tutorial
Metaproteomics tutorial
• beginnerProteomics Proteogenomics Biodiversity Taxonomy microgalaxy -
hands-on tutorial
Hands-on for '16S Microbial Analysis with mothur (extended)' tutorial