hands-on tutorial

Designing plasmids encoding predicted pathways by using the BASIC assembly method

The questions this addresses are:
- How to design plasmids encoding predicted pathways using BASIC assembly method ?
- How to generate scripts enabling the automatic build of plasmids ?

The objectives are:
- Annotate the SBML pathway using Selenzy tool.
- Design plasmids encoding predicted pathways using rpbasicdesign tool.
- Generate dnabot scripts enabling the automatic build of plasmids.

Licence: Creative Commons Attribution 4.0 International

Keywords: Synthetic Biology

Target audience: Students

Resource type: hands-on tutorial

Version: 8

Status: Active

Prerequisites:

Introduction to Galaxy Analyses

Learning objectives:

Annotate the SBML pathway using Selenzy tool.
- Design plasmids encoding predicted pathways using rpbasicdesign tool.
- Generate dnabot scripts enabling the automatic build of plasmids.

Date modified: 2024-06-14

Date published: 2022-05-12

Authors: Guillaume Gricourt, Ioana Popescu, Jean-Loup Faulon, Joan Hérisson, Kenza Bazi-Kabbaj, Thomas Duigou

Contributors: Guillaume Gricourt, Ioana Popescu, Jean-Loup Faulon, Joan Hérisson, Kenza Bazi-Kabbaj, Thomas Duigou

Scientific topics: Synthetic biology


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