Training materials
Tools: BridgeDb or BridgeDb API or ChEBI or Galaxy or InterMineR or ORGANISMS or PhysiCell
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Ready for BioData Management? Intensive Course
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Blog post
Making BridgeDb Derby files with Groovy
•• intermediateBridgeDb Groovy -
Tutorial, Presentation
Materials from 'Introduction to High Performance Computing for Life Scientists' course
•• intermediateComputational biology HPC GPU parallel computing -
Identifier mapping with Cytoscape
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Video
Annotating data using ontologies
• beginnerData management Data integration and warehousing Ontology and terminology Ontologies Annotation Data integration -
Tutorial
InterMine user tutorial
• beginnerData querying Data analysis Data download FAIR -
Documentation
InterMine user manual
• beginnerData querying data visualization Data download FAIR -
Documentation
InterMine operator manual
•• intermediateData integration Data analysis Data publishing FAIR -
Tutorial
How to install and load the Identifier Mapping Service with data needed for gene-to-variant and variant-to-gene
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Tutorial, Vignette
BridgeDbR Tutorial
• beginnerELIXIR RIR, BridgeDb
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