How to install and load the Identifier Mapping Service with data needed for gene-to-variant and variant-to-gene
Tutorial describing how a BridgeDb Identifier Mapping Database (IMS) service can be started and used for gene-variant mapping. It explains how to download the IMS Docker and identifier mapping databases (link sets), load the link sets, and test the web interface.
Scientific topics: Genomics, Genetic variation
Keywords: ELIXIR RIR, BridgeDb
Resource type: Tutorial
Target audience: Biologists
Authors: Friederike Ehrhart, Jonathan Mélius, Egon Willighagen
External resources:
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How to install and load the Identifier Mapping Service with data needed for gene-to-variant and variant-to-gene
https://bigcat-um.github.io/BridgeDbVariantDatabase/Local_BridgeDb_IMS_installation.html
https://tess.elixir-europe.org/materials/how-to-install-and-load-the-identifier-mapping-service-with-data-needed-for-gene-to-variant-and-variant-to-gene
Tutorial describing how a BridgeDb Identifier Mapping Database (IMS) service can be started and used for gene-variant mapping.
Friederike Ehrhart
Jonathan Mélius
Egon Willighagen
Genomics
Genetic variation
ELIXIR RIR, BridgeDb
Biologists