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  3. Department of Bioinformatics - BiGCaT, Maastricht University

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Department of Bioinformatics - BiGCaT, Maastricht University

The department of Bioinformatics-BiGCaT is part of NUTRIM the school of Nutrition and Translational Research in Metabolism at Maastricht University, the Netherlands. It was founded in 2001 by Prof. dr. Chris Evelo aiming at employing bioinformatics approaches in systems biology to integrate experimental data and data with current knowledge. Integrative Systems Biology is being developed and applied in various research fields. The department has four core research areas; 1) Metabolic diseases, 2) Micronutrients, 3) Toxicity and risk Assessment and 4) Rare diseases. Within these areas different types of data, like transcriptomics, proteomics, metabolomics and (epi)genomics data, are collected , integrated and combined with existing knowledge

Type

Organisation

Keywords

micronutrition, Metabolomics, Systems biology, Pathway analysis, interoperability, semantic web, drug discovery, toxicology

ELIXIR node

Netherlands

Department of Bioinformatics - BiGCaT, Maastricht University https://www.bigcat.unimaas.nl/ https://tess.elixir-europe.org/content_providers/department-of-bioinformatics-bigcat-maastricht-university The department of Bioinformatics-BiGCaT is part of NUTRIM the school of Nutrition and Translational Research in Metabolism at Maastricht University, the Netherlands. It was founded in 2001 by Prof. dr. Chris Evelo aiming at employing bioinformatics approaches in systems biology to integrate experimental data and data with current knowledge. Integrative Systems Biology is being developed and applied in various research fields. The department has four core research areas; 1) Metabolic diseases, 2) Micronutrients, 3) Toxicity and risk Assessment and 4) Rare diseases. Within these areas different types of data, like transcriptomics, proteomics, metabolomics and (epi)genomics data, are collected , integrated and combined with existing knowledge /system/content_providers/images/000/000/093/original/logo_05_72dpi.gif?1528366508

Owner

egonw (Egon Willighagen)
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  • Materials (8)
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  • Tutorial, Vignette

    BridgeDbR Tutorial

    ELIXIR node event
    • beginner
    ELIXIR RIR, BridgeDb
  • Tutorial

    How to install and load the Identifier Mapping Service with data needed for gene-to-variant and variant-to-gene

    ELIXIR node event
    Genetic variation Genomics ELIXIR RIR, BridgeDb
  • A network biology workflow to study transcriptomics data of the diabetic liver

    ELIXIR node event
    • beginner
    Biological networks Network Visualization
  • Programming in the Life Sciences

    ELIXIR node event
    • beginner
    Drug discovery Pharmacology SPARQL Wikidata
  • Tutorial

    #metawinterschool contribution by BiGCaT

    ELIXIR node event
    • beginner
    Metabolomics Identifiers ELIXIR RIR, BridgeDb
  • Tutorial

    SPARQLing Biology: a beginners course

    ELIXIR node event
    • beginner
    Biology Query and retrieval Sparql queries Sparql syntax
  • Tutorial

    Use Scholia and Wikidata to find scientific literature

    ELIXIR node event
    • beginner
    Literature
  • BridgeDb-Matlab Usage Instructions

    ELIXIR node event
    ELIXIR RIR, BridgeDb
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TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.