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Tutorial, Vignette
BridgeDbR Tutorial
• beginnerELIXIR RIR, BridgeDb -
Tutorial
#metawinterschool contribution by BiGCaT
• beginnerMetabolomics Identifiers ELIXIR RIR, BridgeDb -
Tutorial
How to install and load the Identifier Mapping Service with data needed for gene-to-variant and variant-to-gene
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Programming in the Life Sciences
• beginnerDrug discovery Pharmacology SPARQL Wikidata -
course materials, Training materials, Slides
Implementation of Data Management Plans & Data Stewardship in practice
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course materials, Training materials, Documentation
ELIXIR eLearning definitions
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A network biology workflow to study transcriptomics data of the diabetic liver
• beginnerBiological networks Network Visualization -
Slides, Training materials
FAIR Data Stewardship - Data sharing, archiving and publishing
• beginnerData Life Cycle FAIR data management data stewardship data repositories data sharing data publication -
Training materials
Essential Steps of the FAIRification Process
•• intermediateFAIR data stewardship metadata linked data -
Slides, PDF
Helis Academy - Data Management Plans, why and how?
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Introduction to FAIR data stewardship
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PDF
An introduction to the role of experimental data in Intellectual Property
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Slides
Helis Academy - Data Sharing, publishing and archiving
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Slides
Helis Academy - Persistent identifiers and their use cases
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Slides
FAIRification & Data modelling
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course materials
Introduction to Persistent Identifiers
•• intermediateData management system relevant metadata for data PID metadata Python API pyhandle Persistent Identifiers -
e-learning
Online course 'Learn to write your Data Management Plan'
• beginnerData management plan data management -
Slides
Helis Academy - FAIRify your data
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Tutorial
Constraint-based reconstruction and analysis toolbox tutorials
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Tutorial
Rare Disease Pathway and Network Analysis
• beginnerPathway analysis Biological networks Network analysis Pathways -
Training materials
Plant Phenotyping Data managment (MIAPPE)
• beginnerPhenomics Plant biology Data management Annotation Data formatting Plant Phenotyping Data-format data sharing -
Tutorial
Use Scholia and Wikidata to find scientific literature
• beginnerLiterature -
Tutorial
SPARQLing Biology: a beginners course
• beginnerBiology Query and retrieval Sparql queries Sparql syntax -
Tutorial
Biological network data tutorial
• beginnerBiological networks Network Visualization -
Tutorial
Multi-omics data visualization with PathVisio
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BridgeDb-Matlab Usage Instructions
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Slidedeck
Workshop FAIR & Data stewardship for the 2020 ITN COSMIC
• beginnerFAIR data Data management Data analysis Data handling Data collection Data management planning Data preserving Data processing Data reuse Data sharing -
Slidedeck
Workshop FAIR & Data stewardship for the 2020 ITN ProEVLifeCycle
• beginnerData management FAIR data Data handling Data analysis Data management planning Data processing Data sharing Data collection Data preserving Data reuse -
Slidedeck
Workshop FAIR & Data stewardship for the 2021 ITN ProEVLifeCycle
• beginnerData management FAIR data Data handling Data analysis Data management planning Data processing Data sharing Data collection Data preserving Data reuse -
Slidedeck
Helis Academy course FAIR data stewardship 2021, Day 1, Introduction Landscape Wrap up
• beginnerData management FAIR data Data analysis Data handling Data management planning
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DTLS - Dutch Techcentre For Life Sciences
DTL focuses on the great potential of high-end technologies in pioneering life science research, and on the skills and solutions to professionally use computers to deal with the ever-growing data streams in research.
41 training materials2 events (211 past events)DTLS - Dutch Techcentre For Life Sciences http://www.dtls.nl https://tess.elixir-europe.org/content_providers/dtls-dutch-techcentre-for-life-sciences DTL focuses on the great potential of high-end technologies in pioneering life science research, and on the skills and solutions to professionally use computers to deal with the ever-growing data streams in research. /system/content_providers/images/000/000/003/original/logo.png?1469458221 -
Department of Bioinformatics - BiGCaT, Maastricht University
The department of Bioinformatics-BiGCaT is part of NUTRIM the school of Nutrition and Translational Research in Metabolism at Maastricht University, the Netherlands. It was founded in 2001 by Prof. dr. Chris Evelo aiming at employing bioinformatics approaches in systems biology to integrate...
8 training materials0 events (1 past event)Department of Bioinformatics - BiGCaT, Maastricht University https://www.bigcat.unimaas.nl/ https://840665.21dyvlrb.asia/content_providers/department-of-bioinformatics-bigcat-maastricht-university The department of Bioinformatics-BiGCaT is part of NUTRIM the school of Nutrition and Translational Research in Metabolism at Maastricht University, the Netherlands. It was founded in 2001 by Prof. dr. Chris Evelo aiming at employing bioinformatics approaches in systems biology to integrate experimental data and data with current knowledge. Integrative Systems Biology is being developed and applied in various research fields. The department has four core research areas; 1) Metabolic diseases, 2) Micronutrients, 3) Toxicity and risk Assessment and 4) Rare diseases. Within these areas different types of data, like transcriptomics, proteomics, metabolomics and (epi)genomics data, are collected , integrated and combined with existing knowledge /system/content_providers/images/000/000/093/original/logo_05_72dpi.gif?1528366508 -
WikiPathways
WikiPathways is a database of biological pathways maintained by and for the scientific community.
1 training materialWikiPathways https://www.wikipathways.org https://tess.elixir-europe.org/content_providers/wikipathways WikiPathways is a database of biological pathways maintained by and for the scientific community. /system/content_providers/images/000/000/660/original/wikipathways-logo-horizontal.svg?1668072305 -
VHP4Safety
Material from the Dutch VHP4Safety project.
4 training materialsVHP4Safety https://vhp4safety.nl/ https://tess.elixir-europe.org/content_providers/vhp4safety Material from the Dutch VHP4Safety project. /system/content_providers/images/000/000/688/original/6XmjhQ2C_400x400.jpg?1696237918
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