Identifier mapping with Cytoscape

This vignette will show you how to map or translate identifiers from one database (e.g., Ensembl) to another (e.g, Entrez Gene). This is a common requirement for data analysis. In the context of Cytoscape, for example, identifier mapping is needed when you want to import data to overlay on a network but you don’t have matching keys.

Keywords: ELIXIR RIR, BridgeDb

Authors: Alex Pico

External resources:

RCy3

Cytoscape

BridgeDbR

BridgeDb

Identifier mapping with Cytoscape https://tess.elixir-europe.org/materials/identifier-mapping-with-cytoscape This vignette will show you how to map or translate identifiers from one database (e.g., Ensembl) to another (e.g, Entrez Gene). This is a common requirement for data analysis. In the context of Cytoscape, for example, identifier mapping is needed when you want to import data to overlay on a network but you don’t have matching keys. ELIXIR RIR, BridgeDb