Training materials
Tools: BioSimulators or Bioconductor or CellNOptR or ISMARA or MGnify or STRING or runBioSimulations
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Tutorial
From transcriptomics to mechanistic models of signalling
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e-learning
ISMARA: A tool to infer genome-wide regulatory interactions
• beginnerSystems biology Gene regulation Transcription factors and regulatory sites Computational modelling -
Tutorial
Tutorial on CellNOpt
•• intermediatePersonalised medicine Simulation experiment Molecular interactions, pathways and networks Transcription factors and regulatory sites Modelling and simulation HPC Biomodelling Signalling -
Tutorial, Documentation
runBioSimulations tutorial and help
• beginnerSystems biology Computational biology Simulation experiment Modelling and simulation biosimulators COMBINE OMEX SED-ML Modeling dynamic simulations SBML BNGL -
Tutorial, Documentation
BioSimulators tutorial and help
•• intermediateSystems biology Computational biology Simulation experiment Modelling and simulation Modeling biomodel dynamic simulations COMBINE OMEX SED-ML SBML BNGL -
Tutorial
MGnify quick tour
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Liftr & sbgr
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Talk
Discussion: Guidelines for submitting data to ExperimentHub
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Talk
HCA Data Access
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Talk
Single cell updates