Tutorial
From transcriptomics to mechanistic models of signalling
This is the Google Colab notebook of the virtual course 'From transcriptomics to mechanistic models of signalling' (2023). You will learn how to process differential gene expression data to estimate transcription factor activities with Decoupler, obtain and process PKNs with OmniPath and pypath, and use CARNIVAL through CORNETO to infer signalling networks that explain the activity patterns.
Activity log
