Training materials
Related resources: Epigenetics dataset or GEEM or Slides | GPAP: the RD-Connect Genome-Phenome An... or Transcriptomics dataset or Workshop FAIR & Data stewardship for the 2020 I...
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Video, Presentation
Introduction to the EGA and its Ecosystem of Tools
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Slidedeck
Workshop FAIR & Data stewardship for the 2021 ITN ProEVLifeCycle
• beginnerData management FAIR data Data handling Analysis Data analysis Data management planning Data processing Data sharing Data collection Data preserving Data reuse -
Video
Annotating data using ontologies
• beginnerData management Data integration and warehousing Ontology and terminology Ontologies Annotation Data integration -
Tutorial
Transcriptomics - CLIP-Seq data analysis from pre-processing to motif detection
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Tutorial
Epigenetics - Hi-C analysis of Drosophila melanogaster cells using HiCExplorer
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Tutorial
Transcriptomics - Visualization of RNA-Seq results with CummeRbund
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Tutorial
Epigenetics - DNA Methylation data analysis
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Tutorial
Transcriptomics - Reference-based RNA-Seq data analysis
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Tutorial
Transcriptomics - Differential abundance testing of small RNAs
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Tutorial
Transcriptomics - De novo transcriptome reconstruction with RNA-Seq