Training materials
Scientific topics: Computational biology or DNA barcoding or FAIR data or Functional genomics or Oncology or Virology
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PDF, slideck/ presentation
Elaboración de un Plan de Gestión de Datos (DMP): teoria y práctica
• beginnerData management FAIR data ELIXIR-CONVERGE DMP DMP tools DMP templates DMP evaluation Data managment plan research data management FAIR principles tools template competency evaluation online e-learning Spanish -
Video
Ten simple rules for making training materials FAIR
• beginnerFAIR data Data handling FAIR ELIXIR-CONVERGE -
WEBINAR: Getting started with command line bioinformatics
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Tutorial, Documentation
runBioSimulations tutorial and help
• beginnerSystems biology Computational biology Simulation experiment Modelling and simulation biosimulators COMBINE OMEX SED-ML Modeling dynamic simulations SBML BNGL -
Tutorial, Documentation
BioSimulators tutorial and help
•• intermediateSystems biology Computational biology Simulation experiment Modelling and simulation Modeling biomodel dynamic simulations COMBINE OMEX SED-ML SBML BNGL -
examples, Tutorial, Jupyter notebook, API reference
DE-Sim examples, tutorials, and documentation
••• advancedSimulation experiment Computer science Mathematics Computational biology Modelling and simulation Visualisation data-driven modeling Computational modelling discrete-event simulation DES object-oriented programming Python data visualization Data Science -
Documentation
BioSimulations tutorial and help
•• intermediateComputational biology Systems biology Simulation experiment Visualisation Modelling and simulation SystemsBiology ComputationalBiology Computational modelling Modeling Biomodelling Model Kinetic modeling SED-ML COMBINE -
Computer Software, workflow
How to use V-pipe (SARS-CoV-2 data)
• beginnerVirology Genetic variation Workflows Variant calling Alignment Read pre-processing coronavirus NGS bioinformatics Variant-calling -
Documentation, API reference
bio.tools documentation
• beginnerBioinformatics Data submission, annotation, and curation Computational biology Ontology and terminology Data retrieval Tools Curation Software Sofware curation Tool curation -
Notes, Scripts
MATHEMATICS BOOT CAMP: Introduction to Complex Systems Tools