Training materials
Content provider: GTN or Galaxy Training
and Contributors: Andrea Argentini or Clair Castle or Erwan Corre or Fidel Ramirez or Jean-Loup Faulon or Joan Hérisson or Jure Dimec or Mateusz Kuzak or Matthias Fahrner or Melanie Foell or Patricia Palagi or Prof. Tom Freeman
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hands-on tutorial
Evaluating and ranking a set of pathways based on multiple metrics
• beginnerSynthetic biology Synthetic Biology -
hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateassembly quality control -
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Masking repeats with RepeatMasker
• beginnerGenome Annotation eukaryote -
hands-on tutorial
Genome annotation with Funannotate
•• intermediateGenome Annotation eukaryote gmod jbrowse1 -
hands-on tutorial
Generating theoretical possible pathways for the production of Lycopene in E.Coli using Retrosynthesis tools
• beginnerSynthetic biology Synthetic Biology -
hands-on tutorial
Designing plasmids encoding predicted pathways by using the BASIC assembly method
• beginnerSynthetic biology Synthetic Biology -
hands-on tutorial
Formation of the Super-Structures on the Inactive X
• beginnerEpigenomics ChIP-seq Epigenetics -
hands-on tutorial
Hi-C analysis of Drosophila melanogaster cells using HiCExplorer
• beginnerEpigenomics Epigenetics -
hands-on tutorial
Identification of the binding sites of the Estrogen receptor
• beginnerEpigenomics ChIP-seq Epigenetics work-in-progress