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Showing 7 events
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Workshops and courses
Structural bioinformatics
4 - 8 November 2024
Online
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Workshops and courses
Structural bioinformatics
2 - 6 October 2023
United Kingdom
Face-to-face
Protein sequence Structure analysis Structure prediction Protein Data Bank in Europe - Knowledge Base Protein Data Bank in Europe Electron Microscopy Data Bank AlphaFold Database Structures (structures) alphafold protein function structural biology atomic resolution fold and topology -
Workshops and courses
Geometric Deep Learning for Protein Structure Data with PyTorch Lightning
6 March 2024
Leuven, Belgium
Face-to-face
advanced bioinformatics -
Workshops and courses
Accessing and interpreting predicted protein structures from AlphaFold database
11 October 2023
Online
Protein structure Structure image Structural biology Protein disordered structure MetaboLights: Metabolomics repository and reference database Chemical Entities of Biological Interest Cross domain (cross-domain) ChEBI Metabolites Molecular building blocks of life Human Cell Atlas Data Coordination Platform Single-cell transcriptomics HCA data portal Complex Portal Proteins (proteins) macromolecular assembly InterPro Europe PubMed Central Literature (literature) Open access UniProt: The Universal Protein Resource Protein Data Bank in Europe - Knowledge Base 3D structure AlphaFold Database DeepMind Artificial intelligence AI Structure prediction -
Workshops and courses
Finding and interpreting protein structure and function data using PDBe-KB
18 October 2023
Online
Protein structure alignment Sequence similarity search Structural similarity search Protein function prediction MetaboLights: Metabolomics repository and reference database Chemical Entities of Biological Interest Cross domain (cross-domain) ChEBI Metabolites Molecular building blocks of life Human Cell Atlas Data Coordination Platform Single-cell transcriptomics HCA data portal Complex Portal Proteins (proteins) macromolecular assembly InterPro Europe PubMed Central Literature (literature) Open access UniProt: The Universal Protein Resource Protein Data Bank in Europe - Knowledge Base 3D structure -
Workshops and courses
Poster winners, PerMedCoE Summer School 2023
5 October 2023
Online
Computational biology Personalised medicine MetaboLights: Metabolomics repository and reference database Chemical Entities of Biological Interest Cross domain (cross-domain) ChEBI Metabolites Molecular building blocks of life Human Cell Atlas Data Coordination Platform Single-cell transcriptomics HCA data portal Complex Portal Proteins (proteins) macromolecular assembly InterPro Europe PubMed Central Literature (literature) Open access UniProt: The Universal Protein Resource Protein Data Bank in Europe - Knowledge Base 3D structure AlphaFold Database DeepMind Artificial intelligence AI Structure prediction cancer Boolean -
Workshops and courses
Studying genes and genomes with Ensembl genome browser
4 October 2023
Online
Genome assembly Genome visualisation MetaboLights: Metabolomics repository and reference database Chemical Entities of Biological Interest Cross domain (cross-domain) ChEBI Metabolites Molecular building blocks of life Human Cell Atlas Data Coordination Platform Single-cell transcriptomics HCA data portal Complex Portal Proteins (proteins) macromolecular assembly InterPro Europe PubMed Central Literature (literature) Open access UniProt: The Universal Protein Resource Protein Data Bank in Europe - Knowledge Base 3D structure AlphaFold Database DeepMind Artificial intelligence AI Structure prediction cancer Boolean Ensembl Genomes DNA & RNA (dna-rna)
Showing 30 materials
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Course materials
Structural bioinformatics
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e-learning
Structural volume data
Electron microscopy Protein structure analysis Structural biology Structural bioinformatics Segmentation Volume matching
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Recorded webinar
Introductory bioinformatics Q&A session: proteins and structures
Bioinformatics
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course materials
Learning structural bioinformatics and evolution with a snake puzzle
•• intermediateBioinformatics Evolutionary biology Molecular biology Protein structure analysis -
High-Throughput Biology 2017 Module 5-Structural Variant Calling
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Book
Bioinformática con Ñ
Bioinformatics Systems biology introduction to bioinformatics structural biology biomolecular databases phylogenetics Programming Sequence Analysis DNA RNA Virtual Screening molecular evolution molecular dynamics Molecular docking normal modes analysis Proteins protein folding protein structure alignment chromatin structure intrinsically disordered proteins data minning R-programming parallel computing bibliography management -
Introduction to Glycoinformatics - lectures and practicals
• beginnertraining proteins and proteomes structural biology glycomics mass spectrometry microbiology protein interactions proteomics frédérique lisacek group -
Training materials
Using bioinformatics to hunt SARS-CoV-2, its variants & its origins – a practical guide
• beginnerBioinformatics for schools, basic bioinformatics, SARS-CoV-2 pandemic, genome analysis, protein sequence analysis, protein structure analysis, virus variants, spike protein, training material -
Informatics on High-Throughput Sequencing Data 2017 Module 5-Structural Variant Calling
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WEBINAR: AlphaFold: what's in it for me?
Bioinformatics Machine Learning Structural Biology Proteins Drug discovery AlphaFold AI Artificial Intelligence Deep learning
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Informatics on High-Throughput Sequencing Data 2018 Module 5-Structural Variant Calling
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Mining enzyme data in UniProtKB using Rhea
• beginnerbiochemistry data mining lipids ontology proteins and proteomes training alan bridge group -
Documentation, Exercise, Handout, Scripts
3DAROC18 - 3C-based data analysis and 3D reconstruction of chromatin folding (2018)
•• intermediateHi-C -
course materials, online course, Training materials
Cloud-SPAN Prenomics
• beginnerBioinformatics Software engineering Genomics Query and retrieval Data handling Cloud computing Shell Command line Amazon Web Services genomics HPC Data analysis bioinformatics -
Training materials
PLAZA is a plant-oriented online resource for comparative, evolutionary and functional genomics
•• intermediateGenotype and phenotype Phylogenomics Evolutionary biology Comparative genomics Functional genomics Plant biology Comparison Visualisation Annotation plants Plants bioinformatics genomics Visualisation Annotation -
Introduction to Linux: The operating system for bioinformatics
• beginnerJohn Innes Centre JIC -
Video
Visualizing Protein Structures and Features
Molecular
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Video
Visualizing RNA Structures and Alignments
Genome Molecular
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Recorded webinar
How to interpret AlphaFold structures
Structural biology Structure analysis
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Slideshow
BiVi theme: Molecular - Structural molecular graphics
Molecular
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Video
Evolution of Protein Structure and Function
Molecular
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Access Bioinformatics Databases with Biopython
data-science life-sciences data-analysis health-informatics
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Introduction to R 2017
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First Steps with Python in Life Sciences
• beginnerdata management data visualisation programming reproducibility training torsten schwede & thierry sengstag group mark ibberson group -
Giving data context, structure and meaning
metadata Ontologies
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Submitting, Finding and Downloading Raw Sequencing Data with ENA
• beginnerFAIR data Metadata Data submission -
Slideshow
Visualization of Biomolecular Structures: State of the Art
Molecular Information visualisation
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Plant Bioinformatics Capstone
physical-science-and-engineering life-sciences research-methods basic-science
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Introduction to Perl: Programming for bioinformatics
• beginnerSoftware engineering perl John Innes Centre JIC -
e-learning
Introduction to CATH database: Exploring structure and function
Protein structure analysis Structure analysis Protein superfamily Structural classification CATH domain
Showing 2 content providers
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GOBLET
GOBLET, the Global Organisation for Bioinformatics Learning, Education and Training, is a legally registered foundation providing a global, sustainable support and networking structure for bioinformatics educators/trainers and students/trainees.
110 training materials0 events (1 past event)GOBLET http://www.mygoblet.org https://tess.elixir-europe.org/content_providers/goblet GOBLET, the Global Organisation for Bioinformatics Learning, Education and Training, is a legally registered foundation providing a global, sustainable support and networking structure for bioinformatics educators/trainers and students/trainees. /system/content_providers/images/000/000/004/original/logo_goblet_trans.png?1469458222 -
EMBL-ABR
EMBL Australia Bioinformatics Resource (EMBL-ABR) is a distributed national research infrastructure providing bioinformatics support to life science researchers in Australia.
EMBL-ABR aims to:- increase Australia’s capacity to collect, integrate, analyse, exploit, share and archive the...
9 training materials0 events (193 past events)EMBL-ABR https://www.embl-abr.org.au/ https://tess.elixir-europe.org/content_providers/embl-abr EMBL Australia Bioinformatics Resource (EMBL-ABR) is a distributed national research infrastructure providing bioinformatics support to life science researchers in Australia. EMBL-ABR aims to: 1. increase Australia’s capacity to collect, integrate, analyse, exploit, share and archive the large heterogeneous data sets now part of modern life sciences research 2. contribute to the development of and provide training in data, tools and platforms to enable Australia’s life science researchers to undertake research in the age of big data 3. showcase Australian research and datasets at an international level 4. enable engagement in international programs that create, deploy and develop best practice approaches to data management, software tools and methods, computational platforms and bioinformatics services. EMBL-ABR is structured as a hub/nodes model, with the Hub located at Melbourne Bioinformatics (formerly VLSCI), University of Melbourne. EMBL-ABR is also currently exploring engagement with the European infrastructure for biological information, ELIXIR, and other relevant international efforts. One of EMBL-ABR Key areas is TRAINING, and as such we are involved in diverse projects relevant for bioinformatics training in Australia, with a current focus on Open Science and Bioinformatics. /system/content_providers/images/000/000/072/original/embl-australia-logo-colour-FIN-e1462860151765.jpg?1488905402