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Face-to-face

Data processing with R tidyverse

6 February 2024

Face-to-face

Showing 30 materials out of 33

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Slidedeck

Helis Academy course FAIR data stewardship 2021, Day 2, Tools for processing and analysing data

• beginner
FAIR data Data management Data handling Analysis Data analysis Data processing
Slidedeck

Helis Academy course FAIR data stewardship 2021, Day 2, Infrastructure for storing and sharing data

• beginner
Data management FAIR data Analysis Data handling Data analysis Data processing Data sharing
Slidedeck

Helis Academy course FAIR data stewardship 2021, Day 3, Electronic Lab Notebooks (ELN)

• beginner
FAIR data Data management Data handling Electronic Lab Notebooks (ELN) Data processing Data analysis
Training materials

FAIR principles applied to bioinformatics

•• intermediate
FAIR Reproducible Science Open science Data analysis Data processing
Slidedeck

Workshop FAIR & Data stewardship for the 2020 ITN COSMIC

• beginner
FAIR data Data management Analysis Data handling Data analysis Data collection Data management planning Data preserving Data processing Data reuse Data sharing
Slidedeck

Workshop FAIR & Data stewardship for the 2020 ITN ProEVLifeCycle

• beginner
Data management FAIR data Data handling Analysis Data analysis Data management planning Data processing Data sharing Data collection Data preserving Data reuse
Slidedeck

Workshop FAIR & Data stewardship for the 2021 ITN ProEVLifeCycle

• beginner
Data management FAIR data Data handling Analysis Data analysis Data management planning Data processing Data sharing Data collection Data preserving Data reuse
course materials

Data processing with R tidyverse

•• intermediate
R-programming
hands-on tutorial

Hands-on for 'dplyr & tidyverse for data processing' tutorial

••• advanced
Software engineering data-science R jupyter-notebook rmarkdown-notebook
hands-on tutorial

Hands-on for 'Mass spectrometry: LC-MS data processing' tutorial

• beginner
Metabolomics metabolomics
hands-on tutorial

Hands-on for 'Mass spectrometry: GC-MS data processing (with XCMS, RAMClustR, RIAssigner, and matchms)' tutorial

•• intermediate
Metabolomics metabolomics
Analysing bisulfite methylation sequencing data

•• intermediate
DNA methylation
Introduction to OpenMS
hands-on tutorial

Hands-on for 'Identification of the binding sites of the Estrogen receptor' tutorial

epigenetics ChIP-seq work-in-progress
hands-on tutorial

Hands-on for 'Species distribution modeling' tutorial

ecology interactive-tools modeling gbif species populations EBV class
Tutorial

ChIP-Seq data analysis - Identification of the binding sites of the Estrogen receptor
hands-on tutorial

Hands-on for 'Formation of the Super-Structures on the Inactive X' tutorial

epigenetics ChIP-seq
hands-on tutorial

Hands-on for 'Mass spectrometry: LC-MS analysis' tutorial

metabolomics
hands-on tutorial

Hands-on for 'Mass spectrometry : GC-MS analysis with metaMS package' tutorial

• beginner
Metabolomics metabolomics
hands-on tutorial

Hands-on for 'CLIP-Seq data analysis from pre-processing to motif detection' tutorial

transcriptomics
hands-on tutorial

Hands-on for 'Identification of the binding sites of the T-cell acute lymphocytic leukemia protein 1 (TAL1)' tutorial

epigenetics ChIP-seq
Tutorial

ChIP-Seq data analysis - Identification of the binding sites of the T-cell acute lymphocytic leukemia protein 1 (TAL1)
Tutorial

Transcriptomics - CLIP-Seq data analysis from pre-processing to motif detection
PhenoMeNal: accessing metabolomics workflows in Galaxy

• beginner
Metabolomics Chemical biology Galaxy
Webinar

ELIXIR Webinar: Requirements in data protection law and the upcoming General Data Protection Regulation (GDPR) implementation

• beginner
GDPR
Introduction to MetFrag
Recorded webinar

Utilising GPUs in scientific algorithms

Computational biology Computer science Data security Software engineering
Recorded webinar

Improving data reproducibility for chemosensitivity assays using MICHA

Chemical biology
Video

FAIR software tools

• beginner
Software engineering FAIR software tools Software
Video

Introduction to Machine Learning Algorithms

•• intermediate
Machine learning

Search results

Data processing with R tidyverse

Helis Academy course FAIR data stewardship 2021, Day 2, Tools for processing and analysing data

Helis Academy course FAIR data stewardship 2021, Day 2, Infrastructure for storing and sharing data

Helis Academy course FAIR data stewardship 2021, Day 3, Electronic Lab Notebooks (ELN)

FAIR principles applied to bioinformatics

Workshop FAIR & Data stewardship for the 2020 ITN COSMIC

Workshop FAIR & Data stewardship for the 2020 ITN ProEVLifeCycle

Workshop FAIR & Data stewardship for the 2021 ITN ProEVLifeCycle

Data processing with R tidyverse

Hands-on for 'dplyr & tidyverse for data processing' tutorial

Hands-on for 'Mass spectrometry: LC-MS data processing' tutorial

Hands-on for 'Mass spectrometry: GC-MS data processing (with XCMS, RAMClustR, RIAssigner, and matchms)' tutorial

Analysing bisulfite methylation sequencing data

Introduction to OpenMS

Hands-on for 'Identification of the binding sites of the Estrogen receptor' tutorial

Hands-on for 'Species distribution modeling' tutorial

ChIP-Seq data analysis - Identification of the binding sites of the Estrogen receptor

Hands-on for 'Formation of the Super-Structures on the Inactive X' tutorial

Hands-on for 'Mass spectrometry: LC-MS analysis' tutorial

Hands-on for 'Mass spectrometry : GC-MS analysis with metaMS package' tutorial

Hands-on for 'CLIP-Seq data analysis from pre-processing to motif detection' tutorial

Hands-on for 'Identification of the binding sites of the T-cell acute lymphocytic leukemia protein 1 (TAL1)' tutorial

ChIP-Seq data analysis - Identification of the binding sites of the T-cell acute lymphocytic leukemia protein 1 (TAL1)

Transcriptomics - CLIP-Seq data analysis from pre-processing to motif detection

PhenoMeNal: accessing metabolomics workflows in Galaxy

ELIXIR Webinar: Requirements in data protection law and the upcoming General Data Protection Regulation (GDPR) implementation

Introduction to MetFrag

Utilising GPUs in scientific algorithms

Improving data reproducibility for chemosensitivity assays using MICHA

FAIR software tools

Introduction to Machine Learning Algorithms