Training materials
Tools: BridgeDb or ChEBI or PLAZA dicots or R or nextstrain.org or omnipy or tidybulk
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Blog post
Making BridgeDb Derby files with Groovy
•• intermediateBridgeDb Groovy -
Presentation
FAIRtracks and Omnipy – FAIRtracks interoperability story
•• intermediateData submission, annotation, and curation Data identity and mapping Data quality management Data governance Workflows Data handling -
e-learning
Interpret phylogenetic data to track SARS-CoV-2 evolution
• beginnerVirology Phylogenetics SARS-CoV-2 -
Identifier mapping with Cytoscape
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Tutorial
A Tidy Transcriptomics introduction to RNA-Seq analyses
• beginnerRNA-Seq Differential Expression Gene Expression RNA-seq Transcriptomics -
Initiation to R programming and descriptive statistics
• beginnerR-programming Descriptive statistics Statistics Bioinformatics -
Video
Annotating data using ontologies
• beginnerData management Data integration and warehousing Ontology and terminology Ontologies Annotation Data integration -
Training materials
PLAZA is a plant-oriented online resource for comparative, evolutionary and functional genomics
•• intermediateGenotype and phenotype Phylogenomics Evolutionary biology Comparative genomics Functional genomics Plant biology Comparison Visualisation Annotation plants Plants bioinformatics genomics Visualisation Annotation -
Tutorial
How to install and load the Identifier Mapping Service with data needed for gene-to-variant and variant-to-gene
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Tutorial, Vignette
BridgeDbR Tutorial
• beginnerELIXIR RIR, BridgeDb