Training materials
Tools: BridgeDb or BridgeDb API or COBREXA.jl or Cytoscape or EDAM-Browser or ORGANISMS or R or stringApp
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Blog post
Making BridgeDb Derby files with Groovy
•• intermediateBridgeDb Groovy -
WEBINAR: bio.tools - making it easier to find, understand and cite biological tools and software
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Tutorial
Tutorials on COBREXA
•• intermediatePersonalised medicine Simulation experiment Modelling and simulation cell-level simulations Biomodelling HPC -
Identifier mapping with Cytoscape
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Initiation to R programming and descriptive statistics
• beginnerR-programming Descriptive statistics Statistics Bioinformatics -
Tutorial
How to install and load the Identifier Mapping Service with data needed for gene-to-variant and variant-to-gene
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Tutorial, Vignette
BridgeDbR Tutorial
• beginnerELIXIR RIR, BridgeDb -
Text-mining exercises
•• intermediateMicrobial ecology Metagenomics Natural language processing Data mining -
Cytoscape stringApp exercises
•• intermediateBioinformatics Molecular interactions, pathways and networks Protein interactions Proteomics Data visualisation