Training materials
Tools: AlphaFold 2 or BridgeDb or BridgeDb API or Cytoscape or EDAM-Browser or ORGANISMS or stringApp
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Blog post
Making BridgeDb Derby files with Groovy
•• intermediateBridgeDb Groovy -
Slideshow, Training materials
Prediction of protein structures and complexes with AlphaFold on the HPC
•• intermediateProtein structure analysis Machine learning Structure prediction Structure visualisation Multiple sequence alignment AlphaFold Database (13181) -
WEBINAR: bio.tools - making it easier to find, understand and cite biological tools and software
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Identifier mapping with Cytoscape
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Tutorial
How to install and load the Identifier Mapping Service with data needed for gene-to-variant and variant-to-gene
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Tutorial, Vignette
BridgeDbR Tutorial
• beginnerELIXIR RIR, BridgeDb -
Text-mining exercises
•• intermediateMicrobial ecology Metagenomics Natural language processing Data mining -
Cytoscape stringApp exercises
•• intermediateBioinformatics Molecular interactions, pathways and networks Protein interactions Proteomics Data visualisation