Training materials
Related resources: COBRA Toolbox or CanCOGeN or Galaxy project guided tours or Metagenomics dataset or RStudio basic course or Sequence analysis slides or Transcriptomics dataset
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lessons
Visualisation with RStudio
• beginnerData visualisation Data Visualization R RStudio ggplot2 -
Video
Applying data standards to the harmonization of COVID-19 datasets from different sources
• beginnerData integration and warehousing Data integration Standards Standardised vocabulary data harmonization Ontologies -
Tutorial
Constraint-based reconstruction and analysis toolbox tutorials
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Tutorial
Transcriptomics - CLIP-Seq data analysis from pre-processing to motif detection
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Tutorial
Transcriptomics - Visualization of RNA-Seq results with CummeRbund
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Tutorial
Transcriptomics - Reference-based RNA-Seq data analysis
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Tutorial
Transcriptomics - Differential abundance testing of small RNAs
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Tutorial
Transcriptomics - De novo transcriptome reconstruction with RNA-Seq
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Tutorial
Metagenomics - Analyses of metagenomics data - The global picture
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Tutorial
Metagenomics - 16S Microbial Analysis with Mothur
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