Training materials
Related resources: Beacon v2: a discovery tool for genomic and phe... or COBRA Toolbox or ChIP-Seq data analysis dataset or EGA Submitter Portal Tutorial or Public Health Alliance for Genomic Epidemiology or Transcriptomics dataset
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Video
EGA Submitter Portal Tutorial
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Video, Presentation
Introduction to the EGA and its Ecosystem of Tools
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Video
Applying data standards to the harmonization of COVID-19 datasets from different sources
• beginnerData integration and warehousing Data integration Standards Standardised vocabulary data harmonization Ontologies -
Tutorial
Constraint-based reconstruction and analysis toolbox tutorials
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Tutorial
Transcriptomics - CLIP-Seq data analysis from pre-processing to motif detection
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Tutorial
ChIP-Seq data analysis - Identification of the binding sites of the Estrogen receptor
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Tutorial
Transcriptomics - Visualization of RNA-Seq results with CummeRbund
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Tutorial
ChIP-Seq data analysis - Identification of the binding sites of the T-cell acute lymphocytic leukemia protein 1 (TAL1)
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Tutorial
Transcriptomics - Reference-based RNA-Seq data analysis
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Tutorial
Transcriptomics - Differential abundance testing of small RNAs
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