Training materials
Related resources: Assembly slides or Metagenomics dataset or Proteomics dataset or Slides | Introduction to the EGA and sharing se... or Transcriptomics dataset or Transcriptomics slides or seq-seq-pan
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Pan genomics tutorial using Minima2 and seq-seq-pan
• beginnerpan genomics genome alignment Minimap2 alignment seq-seq-pan R visualization genome alignment -
Video, Presentation
Introduction to the EGA and its Ecosystem of Tools
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Tutorial
Transcriptomics - CLIP-Seq data analysis from pre-processing to motif detection
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Tutorial
Assembly - Unicycler Assembly
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Tutorial
Transcriptomics - Visualization of RNA-Seq results with CummeRbund
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Tutorial
Proteomics - Peptide and Protein ID using OpenMS tools
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Tutorial
Assembly - De Bruijn Graph Assembly
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Tutorial
Assembly - Introduction to Genome Assembly
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Tutorial
Transcriptomics - Reference-based RNA-Seq data analysis
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Tutorial
Transcriptomics - Differential abundance testing of small RNAs
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