Training materials
Tools: BridgeDbR or Cufflinks or European Nucleotide Archive (ENA) or InterMineR or ORGANISMS or REDCap or TargetMine
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Video
RDMbites | REDCap: how to archive your project
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Identifier mapping with Cytoscape
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Video
Annotating data using ontologies
• beginnerData management Data integration and warehousing Ontology and terminology Ontologies Annotation Data integration -
Tutorial
InterMine user tutorial
• beginnerData querying Data analysis Data download FAIR -
Documentation
InterMine user manual
• beginnerData querying data visualization Data download FAIR -
Documentation
InterMine operator manual
•• intermediateData integration Data analysis Data publishing FAIR -
Tutorial
#metawinterschool contribution by BiGCaT
• beginnerMetabolomics Identifiers ELIXIR RIR, BridgeDb -
Tutorial, Vignette
BridgeDbR Tutorial
• beginnerELIXIR RIR, BridgeDb -
TargetMine tutorials Tutorials for an InterMine designed to help identify drug targets.
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Text-mining exercises
•• intermediateMicrobial ecology Metagenomics Natural language processing Data mining