Training materials
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course materials, online course, Training materials
Cloud-SPAN Prenomics
• beginnerBioinformatics Software engineering Genomics Query and retrieval Data handling Cloud computing Shell Command line Amazon Web Services genomics HPC Data analysis bioinformatics -
hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateassembly quality control -
WEBINAR: Getting started with R
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hands-on tutorial
Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)
• beginnerSequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Antimicrobial Resistance Assembly amr assembly gmod jbrowse1 microgalaxy nanopore -
hands-on tutorial
Genome assembly using PacBio data
•• intermediateSequence assembly Assembly assembly pacbio -
hands-on tutorial
Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data
• beginnerSequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Assembly assembly illumina microgalaxy -
hands-on tutorial
Hands-on for 'Antibiotic resistance detection' tutorial
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Video, Training materials, E-learning
Semantic Standards
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Data handling Standardisation and normalisation Clinical data Data semantics FAIR Standards Ontology SNOMED CT LOINC ATC CHOP ICD Interoperability -
Slidedeck
Helis Academy course FAIR data stewardship 2021, Day 3, Electronic Lab Notebooks (ELN)
• beginnerFAIR data Data management Data handling Electronic Lab Notebooks (ELN) Data processing Data analysis -
Slidedeck
Helis Academy course FAIR data stewardship 2021, Day 4, Data carpentry
• beginnerFAIR data Data management Data handling Data carpentry Data analysis