Training materials
Difficulty level: Advanced or Beginner
and Resource type: Computer Science or Computer Software or Jupyter notebook or Mock data or Toolkit
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Bioinformatics, Computational Biology, Computer Science, Programming, Coding, Education
R for Beginners
• beginnerBioinformatics Computational biology Computer science Coding Programming -
Toolkit
ELIXIR’s Impact Toolkit, to support performance and impact evaluation in a distributed data research infrastructure for the life sciences
• beginnerImpact Research Infrastructure Monitoring Indicator Evaluation Sustainability -
Video, Training materials, Mock data, E-learning
RDF Schema and Data Visualization
• beginnerData visualisation Medical informatics FAIR data Data management Computer science Ontology visualisation Visualisation Data retrieval Data handling Query and retrieval Clinical data SPARQL Data visualization RDF Knowledge graph GraphDB Mock data -
Jupyter notebook
BioExcel Building Blocks (BioBB) Training Material
• beginnermolecular dynamics Docking Modeling life sciences -
examples, Tutorial, Jupyter notebook, API reference
DE-Sim examples, tutorials, and documentation
••• advancedSimulation experiment Computer science Mathematics Computational biology Modelling and simulation Visualisation data-driven modeling Computational modelling discrete-event simulation DES object-oriented programming Python data visualization Data Science -
Computer Software, workflow
How to use V-pipe (SARS-CoV-2 data)
• beginnerVirology Genetic variation Workflows Variant calling Alignment Read pre-processing coronavirus NGS bioinformatics Variant-calling -
Slides, Computer Software
ELIXIR Beacons (at ISMB / ECCB)
• beginnerbeacon -
Jupyter notebook, PDF
Introductory image processing on biological images using python.
• beginner