Training materials
Target audience: Students
and Contributors: Björn Grüning or Christine Balmer, UKCEH or Coline Royaux or David Philip Judge or Ioana Popescu or Nate Coraor
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hands-on tutorial
Pathway analysis with the MINERVA Platform
•• intermediateTranscriptomics bulk cyoa rna-seq viz -
hands-on tutorial
Hands-on for 'Visualize EBV cube data with Panoply netCDF viewer' tutorial
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hands-on tutorial
Evaluating and ranking a set of pathways based on multiple metrics
• beginnerSynthetic biology Synthetic Biology -
hands-on tutorial
Exome sequencing data analysis for diagnosing a genetic disease
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
Generating theoretical possible pathways for the production of Lycopene in E.Coli using Retrosynthesis tools
• beginnerSynthetic biology Synthetic Biology -
hands-on tutorial
Designing plasmids encoding predicted pathways by using the BASIC assembly method
• beginnerSynthetic biology Synthetic Biology -
hands-on tutorial
Secretome Prediction
•• intermediateProteomics human work-in-progress -
hands-on tutorial
Label-free versus Labelled - How to Choose Your Quantitation Method
• beginnerProteomics DDA -
hands-on tutorial
Peptide and Protein Quantification via Stable Isotope Labelling (SIL)
••• advancedProteomics DDA SILAC -
hands-on tutorial
Peptide and Protein ID using SearchGUI and PeptideShaker
• beginnerProteomics DDA HeLa