Training materials
Scientific topics: Protein and peptide identification
and Target audience: Students or teachers
and Contributors: Björn Grüning or Celia van Gelder or Jalview Coordinator or Jason Williams or John "Scooter" Morris or John Chilton or Lieven Clement or Manimozhiyan Arumugam or Marek Suchanek or Marek Vrbacky or Ms. Yo Yehudi or Nils Peder Willassen or Praveen Kumar
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hands-on tutorial
metaQuantome 3: Taxonomy
•• intermediateProteomics Proteogenomics Metatranscriptomics Microbial ecology Metagenomics Taxonomy microgalaxy -
hands-on tutorial
Secretome Prediction
•• intermediateProteomics human work-in-progress -
hands-on tutorial
Label-free versus Labelled - How to Choose Your Quantitation Method
• beginnerProteomics DDA -
hands-on tutorial
Proteogenomics 1: Database Creation
•• intermediateProteomics proteogenomics -
hands-on tutorial
Proteogenomics 2: Database Search
•• intermediateProteomics proteogenomics -
hands-on tutorial
Peptide and Protein Quantification via Stable Isotope Labelling (SIL)
••• advancedProteomics DDA SILAC -
hands-on tutorial
metaQuantome 2: Function
•• intermediateProteomics Proteogenomics Metatranscriptomics Microbial ecology Metagenomics microgalaxy -
hands-on tutorial
Peptide and Protein ID using SearchGUI and PeptideShaker
• beginnerProteomics DDA HeLa -
hands-on tutorial
Proteogenomics 3: Novel peptide analysis
•• intermediateProteomics proteogenomics -
hands-on tutorial
Detection and quantitation of N-termini (degradomics) via N-TAILS
•• intermediateProteomics
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