hands-on tutorial
Proteogenomics 2: Database Search
The questions this addresses are:
- How to identify variant proteoforms in MS data by searching with the customized Protein database?
The objectives are:
- A proteogenomic data analysis of mass spectrometry data to identify and visualize variant peptides.
Licence: Creative Commons Attribution 4.0 International
Keywords: Proteomics, proteogenomics
Target audience: Students
Resource type: hands-on tutorial
Version: 22
Status: Active
Prerequisites:
- Introduction to Galaxy Analyses
- Proteogenomics 1: Database Creation
Learning objectives:
A proteogenomic data analysis of mass spectrometry data to identify and visualize variant peptides.
Date modified: 2024-06-14
Date published: 2018-11-20
Contributors: James Johnson, Pratik Jagtap, Praveen Kumar, Ray Sajulga, Subina Mehta, Timothy J. Griffin
Scientific topics: Proteomics
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