hands-on tutorial

metaQuantome 2: Function

The questions this addresses are:
- How do I look at differentially expressed proteins?
- How do I get top 5 or 10 function present in the sample?
- How can I visualize my results?

The objectives are:
- A functional and quantitational analysis of metaproteomic mass spectrometry data.

Licence: Creative Commons Attribution 4.0 International

Keywords: Proteomics, microgalaxy

Target audience: Students

Resource type: hands-on tutorial

Version: 14

Status: Active

Prerequisites:

  • Introduction to Galaxy Analyses
  • metaQuantome 1: Data creation

Learning objectives:

A functional and quantitational analysis of metaproteomic mass spectrometry data.

Date modified: 2024-03-15

Date published: 2020-10-29

Authors: Emma Leith, Marie Crane, Pratik Jagtap, Praveen Kumar, Subina Mehta, Timothy J. Griffin

Contributors: Emma Leith, Marie Crane, Pratik Jagtap, Praveen Kumar, Subina Mehta, Timothy J. Griffin

Scientific topics: Proteomics, Proteogenomics, Metatranscriptomics, Microbial ecology, Metagenomics


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