Training materials
Difficulty level: Intermediate
and Contributors: Björn Grüning or Celia van Gelder or David Philip Judge or Dr. Manuel Corpas or Jamie Edwards or Jordi Rambla or Manimozhiyan Arumugam or Marek Vrbacky or Nils Peder Willassen or Timothy J. Griffin
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hands-on tutorial
Hands-on for 'metaQuantome 3: Taxonomy' tutorial
•• intermediateProteomics proteomics microbiome -
hands-on tutorial
Hands-on for 'Secretome Prediction' tutorial
•• intermediateProteomics proteomics human -
hands-on tutorial
Hands-on for 'Proteogenomics 1: Database Creation' tutorial
•• intermediateProteomics proteomics proteogenomics -
hands-on tutorial
Hands-on for 'Proteogenomics 2: Database Search' tutorial
•• intermediateProteomics proteomics proteogenomics -
hands-on tutorial
Hands-on for 'metaQuantome 2: Function' tutorial
•• intermediateProteomics proteomics microbiome -
hands-on tutorial
Hands-on for 'metaQuantome 1: Data creation' tutorial
•• intermediateProteomics proteomics microbiome -
hands-on tutorial
Hands-on for 'Proteogenomics 3: Novel peptide analysis' tutorial
•• intermediateProteomics proteomics proteogenomics -
hands-on tutorial
Hands-on for 'Detection and quantitation of N-termini (degradomics) via N-TAILS' tutorial
•• intermediateProteomics proteomics -
Documentation, Exercise, Handout, Scripts
PPB18 - Programming in Python for Biologists (2018)
•• intermediateData retrieval Data handling Bioinformatics Biology Biological databases -
Text-mining exercises
•• intermediateMicrobial ecology Metagenomics Natural language processing Data mining