Training materials
Difficulty level: Intermediate
and Contributors: Anthony Bretaudeau or Charlotte Soneson or Célia Michotey or Erasmus+ Programme or Erik Hedman or Timothy J. Griffin
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hands-on tutorial
Long non-coding RNAs (lncRNAs) annotation with FEELnc
•• intermediateGenome Annotation eukaryote -
hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateassembly quality control -
hands-on tutorial
Refining Genome Annotations with Apollo (eukaryotes)
•• intermediateGenome Annotation apollo2 cyoa eukaryote gmod jbrowse1 -
hands-on tutorial
Refining Genome Annotations with Apollo (prokaryotes)
•• intermediateGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation apollo2 gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
Genome annotation with Maker (short)
•• intermediateGenome Annotation eukaryote gmod jbrowse1 maker -
hands-on tutorial
Genome assembly using PacBio data
•• intermediateSequence assembly Assembly assembly pacbio -
hands-on tutorial
Introduction to Machine Learning using R
•• intermediateStatistics and probability Statistics and machine learning interactive-tools -
hands-on tutorial
metaQuantome 3: Taxonomy
•• intermediateProteomics Proteogenomics Metatranscriptomics Microbial ecology Metagenomics Taxonomy microgalaxy -
hands-on tutorial
Proteogenomics 1: Database Creation
•• intermediateProteomics proteogenomics -
hands-on tutorial
Proteogenomics 2: Database Search
•• intermediateProteomics proteogenomics