Training materials
Licence: Creative Commons Attribution 4.0 International
and Contributors: Alex Ostrovsky or Emily Angiolini or Frederick Carver or Gildas Le Corguillé or Ioana Popescu or Mihaela Martis or Oliver Davis or Prof. Tom Freeman
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hands-on tutorial
Evaluating and ranking a set of pathways based on multiple metrics
• beginnerSynthetic biology Synthetic Biology -
hands-on tutorial
Hands-on for 'Calling variants in non-diploid systems' tutorial
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hands-on tutorial
Creating Galaxy tools from Conda Through Deployment
• beginnerSoftware engineering Development in Galaxy -
hands-on tutorial
Generating theoretical possible pathways for the production of Lycopene in E.Coli using Retrosynthesis tools
• beginnerSynthetic biology Synthetic Biology -
hands-on tutorial
Designing plasmids encoding predicted pathways by using the BASIC assembly method
• beginnerSynthetic biology Synthetic Biology -
hands-on tutorial
Hands-on for 'VGP assembly pipeline' tutorial
•• intermediateassembly pacbio eukaryote VGP -
hands-on tutorial
Hands-on for 'VGP assembly pipeline - short version' tutorial
•• intermediateassembly pacbio eukaryote VGP -
hands-on tutorial
De novo transcriptome assembly, annotation, and differential expression analysis
• beginnerTranscriptomics -
hands-on tutorial
Downstream Single-cell RNA analysis with RaceID
• beginnerTranscriptomics Single Cell -
hands-on tutorial
Mass spectrometry: LC-MS preprocessing with XCMS
•• intermediateMetabolomics
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