Training materials
Authors: malloryfreeberg or nsoranzo or vivekbhr
and Related resources: DS Wizard ELIXIR-Norway or Input datasets or Transcriptomics slides or recorded intro to hackathon
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Tutorial
Epigenetics - Hi-C analysis of Drosophila melanogaster cells using HiCExplorer
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Tutorial
ChIP-Seq data analysis - Identification of the binding sites of the Estrogen receptor
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Tutorial
ChIP-Seq data analysis - Identification of the binding sites of the T-cell acute lymphocytic leukemia protein 1 (TAL1)
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Tutorial
Introduction to Galaxy Analyses - From peaks to genes
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Tutorial
Transcriptomics - Reference-based RNA-Seq data analysis
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Tutorial
Transcriptomics - Differential abundance testing of small RNAs
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Tutorial
Transcriptomics - De novo transcriptome reconstruction with RNA-Seq