Training materials
Licence: Creative Commons Attribution 4.0 International
and Keywords: Galaxy Australia or IBERS or Shell or Transcriptomics
and Authors: Chew, Tracy (orcid: 0000-0001-9529-7705) or Maria Doyle or SAiGENCI
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WORKSHOP: RNA-Seq: reads to differential genes and pathways
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WEBINAR: Where to go when your bioinformatics outgrows your compute
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hands-on tutorial
Visualization of RNA-Seq results with Volcano Plot
• beginnerTranscriptomics -
hands-on tutorial
Visualization of RNA-Seq results with Volcano Plot in R
•• intermediateTranscriptomics interactive-tools -
hands-on tutorial
3: RNA-seq genes to pathways
• beginnerTranscriptomics mouse -
hands-on tutorial
GO Enrichment Analysis
• beginnerTranscriptomics -
hands-on tutorial
2: RNA-seq counts to genes
• beginnerTranscriptomics QC limma-voom mouse -
hands-on tutorial
1: RNA-Seq reads to counts
• beginnerTranscriptomics QC collections mouse -
hands-on tutorial
Visualization of RNA-Seq results with heatmap2
• beginnerTranscriptomics -
hands-on tutorial
Reference-based RNA-Seq data analysis
• beginnerTranscriptomics QC bulk collections cyoa drosophila rna-seq