Training materials
Resource type: Tutorial
and Authors: Anton Nekrutenko or Jonathan Karr or Kathi Zarnack or Lucille Delisle or Praveen Kumar or bebatut or nekrut
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Tutorial, Documentation
runBioSimulations tutorial and help
• beginnerSystems biology Computational biology Simulation experiment Modelling and simulation biosimulators COMBINE OMEX SED-ML Modeling dynamic simulations SBML BNGL -
Tutorial, Documentation
BioSimulators tutorial and help
•• intermediateSystems biology Computational biology Simulation experiment Modelling and simulation Modeling biomodel dynamic simulations COMBINE OMEX SED-ML SBML BNGL -
examples, Tutorial, Jupyter notebook, API reference
DE-Sim examples, tutorials, and documentation
••• advancedSimulation experiment Computer science Mathematics Computational biology Modelling and simulation Visualisation data-driven modeling Computational modelling discrete-event simulation DES object-oriented programming Python data visualization Data Science -
Tutorial
Datanator tutorial
• beginnerMolecular biology Cell biology Systems biology Bioinformatics Omics Query and retrieval Filtering genomics Proteomics transcriptomics Metabolomics reaction kinetics Kinetic modeling meta analysis -
Tutorial
Transcriptomics - CLIP-Seq data analysis from pre-processing to motif detection
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Tutorial
Data Manipulation - Collections: Multisample Analysis
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Tutorial
Data Manipulation - Collections: Using dataset collection
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Tutorial
User Interface and Features - Histories: Understanding Galaxy history system
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Tutorial
Contributing to the Galaxy Training Material - Creating a new tutorial
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Tutorial
Assembly - Making sense of a newly assembled genome