NBIS

NBIS is a distributed national bioinformatics infrastructure, supporting life sciences in Sweden

NBIS https://tess.elixir-europe.org/content_providers/nbis NBIS is a distributed national bioinformatics infrastructure, supporting life sciences in Sweden /system/content_providers/images/000/000/071/original/Screenshot_2019-06-11_at_16.06.01.png?1560264937
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Human Protein Atlas (HPA) - Introductory YouTube video

On the Human Protein Atlas you can study in which tissues and cells your favorite protein is expressed. In this live demo from AACR, you can learn how to find tissue specific proteins, see IHC stainings of proteins in normal and cancer tissues and explore proteins expressed in the mouse

Scientific topics: Gene expression, Protein expression

Human Protein Atlas (HPA) - Introductory YouTube video https://tess.elixir-europe.org/materials/human-protein-atlas-hpa-introductory-youtube-video On the Human Protein Atlas you can study in which tissues and cells your favorite protein is expressed. In this live demo from AACR, you can learn how to find tissue specific proteins, see IHC stainings of proteins in normal and cancer tissues and explore proteins expressed in the mouse Gene expression Protein expression
NBIS Reproducible research course

The material available on these pages is produced and maintained for a course on how to make your data analyses reproducible. In particular, it covers: Data management Conda Snakemake Git Jupyter R Markdown Docker

Keywords: data management, Reproducibility, Data analysis

Resource type: Training materials

NBIS Reproducible research course https://tess.elixir-europe.org/materials/nbis-reproducible-research-course The material available on these pages is produced and maintained for a course on how to make your data analyses reproducible. In particular, it covers: Data management Conda Snakemake Git Jupyter R Markdown Docker Leif Wigge Rasmus Ågren John Sundh data management, Reproducibility, Data analysis bioinformaticians
Showing 11 upcoming events. Found 54 past events. View all results.
  • Introduction to Data Management Practices

    1 - 4 December 2020

    Uppsala University

    Elixir node event
    Introduction to Data Management Practices https://tess.elixir-europe.org/events/introduction-to-data-management-practices-b864d390-24d9-4180-a59d-33074ac8da81 https://nbisweden.github.io/workshop-dm-practices/ Introduction to Data Management Practices National course open for PhD students, postdocs, researchers and other employees within all Swedish universities. The course is geared towards life scientists wanting to take the first steps towards a more systematic and reproducible approach to analysing and managing research data. 2020-12-01 09:00:00 UTC 2020-12-04 00:00:00 UTC Uppsala University Uppsala University [] Niclas Jareborg - niclas.jareborg@scilifelab.se [] [] [] [] []
  • Introduction to Data Management Practices

    1 - 4 December 2020

    Uppsala University

    Elixir node event
    Introduction to Data Management Practices https://tess.elixir-europe.org/events/introduction-to-data-management-practices https://nbisweden.github.io/workshop-dm-practices/ Introduction to Data Management Practices National course open for PhD students, postdocs, researchers and other employees within all Swedish universities. The course is geared towards life scientists wanting to take the first steps towards a more systematic and reproducible approach to analysing and managing research data. 2020-12-01 09:00:00 UTC 2020-12-04 00:00:00 UTC Uppsala University Uppsala University [] Niclas Jareborg - niclas.jareborg@scilifelab.se [] [] [] [] []
  • NBIS Course Umeå: Python programming with applications to bioinformatics, Umeå

    19 - 24 October 2020

    Glasburen

    Elixir node event
    NBIS Course Umeå: Python programming with applications to bioinformatics, Umeå https://tess.elixir-europe.org/events/nbis-course-umea-python-programming-with-applications-to-bioinformatics-umea-2dee9df0-cf81-4e7d-b14e-1dd65909a0fa #training TBA edu.intro-python@nbis.se or education@nbis.se Course leaders: Nina Norgren and Malin Klang 2020-10-19 09:00:00 UTC 2020-10-24 00:00:00 UTC Glasburen Glasburen [] jessica.lindvall@scilifelab.se [] [] [] [] #trainingtraining
  • NBIS Course Uppsala: Python programming with applications to bioinformatics

    19 - 24 October 2020

    Uppsala, Sweden

    Elixir node event
    NBIS Course Uppsala: Python programming with applications to bioinformatics https://tess.elixir-europe.org/events/nbis-course-uppsala-python-programming-with-applications-to-bioinformatics #training TBA edu.intro-python@nbis.se or education@nbis.se Course leaders: Nina Norgren and Malin Klang 2020-10-19 09:00:00 UTC 2020-10-24 00:00:00 UTC Uppsala, Sweden Uppsala Sweden [] jessica.lindvall@scilifelab.se [] [] [] [] #trainingtraining
  • NBIS course Uppsala: Introduction to biostatistics and machine learning

    16 - 21 November 2020

    Uppsala, Sweden

    Elixir node event
    NBIS course Uppsala: Introduction to biostatistics and machine learning https://tess.elixir-europe.org/events/introduction-to-biostatistics-and-machine-learning-nbis-course-ddcd25d4-da18-41a5-97cd-8ac0ea487f95 #training #url: https://www.scilifelab.se/events/introduction-to-biostatistics-and-machine-learning/   email: edu.ml-biostatistics@nbis.se Important dates Application closes: 2020-09-14 Confirmation to accepted students:  2020-09-18 2020-11-16 09:00:00 UTC 2020-11-21 00:00:00 UTC Uppsala, Sweden Uppsala Sweden [] jessica.lindvall@scilifelab.se [] [] [] [] #trainingtraining
  • NBIS course Lund: Omics integration and Systems biology

    5 - 10 October 2020

    Elixir node event
    NBIS course Lund: Omics integration and Systems biology https://tess.elixir-europe.org/events/nbis-course-lund-omics-integration-and-systems-biology #training #url: https://www.scilifelab.se/event/omics-integration-and-systems-biology-3 email: edu.omics-integration@nbis.se 2020-10-05 09:00:00 UTC 2020-10-10 00:00:00 UTC [] jessica.lindvall@scilifelab.se [] [] [] [] #trainingtraining
  • NBIS Course Uppsala: Python programming with applications to bioinformatics

    19 - 24 October 2020

    Uppsala, Sweden

    Elixir node event
    NBIS Course Uppsala: Python programming with applications to bioinformatics https://tess.elixir-europe.org/events/nbis-course-uppsala-python-programming-with-applications-to-bioinformatics-6f01780c-fd8b-411e-8c7c-95250e6bb979 #training #url: https://www.scilifelab.se/event/python-programming-with-applications-to-bioinformatics-uppsala-2 email: edu.intro-python@nbis.se  2020-10-19 09:00:00 UTC 2020-10-24 00:00:00 UTC Uppsala, Sweden Uppsala Sweden [] jessica.lindvall@scilifelab.se [] [] [] [] #trainingtraining
  • Introduction to Bioinformatics using NGS data (NBIS/SciLifeLab course)

    9 - 14 November 2020

    Uppsala, Sweden

    Elixir node event
    Introduction to Bioinformatics using NGS data (NBIS/SciLifeLab course) https://tess.elixir-europe.org/events/introduction-to-bioinformatics-using-ngs-data-nbis-scilifelab-course-52950704-5161-491b-b419-88352fc7f45c #training  #url: https://www.scilifelab.se/event/introduction-to-bioinformatics-using-ngs-data   email: edu.intro-ngs@nbis.se 2020-11-09 09:00:00 UTC 2020-11-14 00:00:00 UTC Uppsala, Sweden Uppsala Sweden [] Malin Larsson - malin.larsson@scilifelab.se [] [] [] [] []
  • NBIS Course Umeå: Python programming with applications to bioinformatics, Umeå

    19 - 24 October 2020

    Glasburen

    Elixir node event
    NBIS Course Umeå: Python programming with applications to bioinformatics, Umeå https://tess.elixir-europe.org/events/nbis-course-umea-python-programming-with-applications-to-bioinformatics-umea-907bf717-7d0a-48d3-b284-1d050de6358d #training #url: https://www.scilifelab.se/event/python-programming-with-applications-to-bioinformatics-umea-2 email: edu.intro-python@nbis.se   2020-10-19 09:00:00 UTC 2020-10-24 00:00:00 UTC Glasburen Glasburen [] jessica.lindvall@scilifelab.se [] [] [] [] #trainingtraining
  • NBIS course: Epigenomics

    9 - 14 November 2020

    Solna, Sweden

    Elixir node event
    NBIS course: Epigenomics https://tess.elixir-europe.org/events/nbis-course-epigenomics TBA For questions please contact: edu.epigenomics@nbis.se Course leaders: Agata Smialowska, Olga Dethlefsen, Jakub Westholm 2020-11-09 09:00:00 UTC 2020-11-14 00:00:00 UTC Solna, Sweden Solna Sweden [] jessica.lindvall@scilifelab.se [] [] [] [] []
  • Introduction to Bioinformatics using NGS data (NBIS/SciLifeLab course)

    9 - 14 November 2020

    Uppsala, Sweden

    Elixir node event
    Introduction to Bioinformatics using NGS data (NBIS/SciLifeLab course) https://tess.elixir-europe.org/events/introduction-to-bioinformatics-using-ngs-data-nbis-scilifelab-course-4efe0ec0-9424-4f3a-8364-0215abfa4e71 #training  For questions please contact: edu.intro-ngs@nbis.se Course leaders Roy Francis, Malin Larsson, Martin Dahlö 2020-11-09 09:00:00 UTC 2020-11-14 00:00:00 UTC Uppsala, Sweden Uppsala Sweden [] Malin Larsson - malin.larsson@scilifelab.se [] [] [] [] []