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Workshops and courses
EBAII : Ecole de Bioinformatique "Traitement des données de génomique obtenues par séquençage à haut débit" niveau intermédiaire - session 2025
1 - 6 June 2025
Roscoff, France
Face-to-face
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Workshops and courses
EBAII : Ecole de Bioinformatique "Traitement des données de génomique obtenues par séquençage à haut débit" niveau débutant - session 2025
16 - 21 November 2025
Roscoff, France
Face-to-face
Showing 30 materials
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GeostatsGuy/DataScienceInteractivePython
Python script Python Data science
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DavisLaboratory/GeoMXAnalysisWorkflow
Spatial transcriptomics
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e-learning
QGIS Web Feature Services
• beginnerEcology GIS Geographical Information System Maps OGC Spatial data WFS earth-system -
e-learning
Ocean Data View (ODV)
• beginnerClimate ODV earth-system geographical information system maps marine data netcdf data ocean -
PickyBinders/geometric-learning-protein-structures-course
Machine learning Proteomics
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Omics descriptors calculation R package
Gene Ontology
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cxli233/FriendsDontLetFriends
Data visualisation Data visualization R
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cxli233/Online_R_learning
R script R
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gvegayon/appliedhpcr
R script High performance computing R
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Working with Big Cancer Data in the Collaboratory Cloud 2017 Module 1-Introduction to the Cancer Genome Collagboratory
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Bioinformatics for Cancer Genomics 2018 Module 10-Sharing and Scaling a VM
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e-learning
The Genomics Era: the Future of Genetics in Medicine
•• intermediateRare diseases Rare Diseases & Research -
RRegrs package
Regression Models
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e-learning
Biodiversity data exploration
• beginnerEcology data quality taxonomic data -
video
RDMbites | High-throughput sequencing data repositories
data management RDM
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e-learning
Making clinical datasets FAIR
• beginnerFAIR Data, Workflows, and Research data stewardship fair open -
e-learning
From peaks to genes
• beginnerIntroduction to Galaxy Analyses -
Recorded webinar
Biocuration in industry
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WEBINAR: What exactly is bioinformatics?
Bioinformatics
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e-learning
Visualize Climate data with Panoply netCDF viewer
• beginnerClimate interactive-tools -
e-learning
Visualize EBV cube data with Panoply netCDF viewer
• beginnerEcology Data visualization EBV cube interactive-tools -
Video
What happens to your data?
Data management metadata ArrayExpress
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WEBINAR: Getting started with whole genome mapping and variant calling on the command line
Genome mapping Variant calling Bioinformatics Workflows
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Chip-seq: Peak calling tutorial
Chip-seq NGS Peak calling
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e-learning
RNA Seq Counts to Viz in R
• beginnerTranscriptomics interactive-tools -
How to publish FAIR Data with PANGAEA
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Introduction to FAIRDOMHub
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Recorded webinar
Integrating publications into bioinformatics analysis
Natural language processing
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e-learning
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial resistance Genome Annotation amr gmod … -
WEBINAR: Getting started with RNAseq: Transforming raw reads into biological insights
Bioinformatics Transcriptomics RNA-seq RNAseq Gene expression
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NRIS
An important foundation for the successful collaboration on e-infrastructure in Norway is NRIS - a collaboration of five organisations to pool competencies, resources and services. The collaboration was until recently known as "the Metacenter".
NRIS consists of highly qualified IT staff at...
0 events (6 past events)NRIS https://www.sigma2.no/nris https://tess.elixir-europe.org/content_providers/sigma2-nris An important foundation for the successful collaboration on e-infrastructure in Norway is NRIS - a collaboration of five organisations to pool competencies, resources and services. The collaboration was until recently known as "the Metacenter". NRIS consists of highly qualified IT staff at the four universities NTNU, the Universities of Bergen, Oslo and Tromsø and employees at Sigma2, counting almost 50 people. The purpose is a geographically distributed competence network that ensures that all researchers who use the national e-infrastructure have quick and easy access to domain-specific support close to the user. /system/content_providers/images/000/000/635/original/NRIS-Logo.png?1653914194 -
Jalview
Jalview (www.jalview.org) is free-to-use sequence alignment and analysis visualisation software that links genomic variants, protein alignments and 3D structure.
Protein, RNA and DNA data can be directly accessed from public databases (e.g. Pfam, Rfam, PDB, UniProt and ENA etc.). Jalview has...
0 events (2 past events)Jalview http://www.jalview.org/ https://861596.fd6au1zn.asia/content_providers/jalview Jalview (www.jalview.org) is free-to-use sequence alignment and analysis visualisation software that links genomic variants, protein alignments and 3D structure. Protein, RNA and DNA data can be directly accessed from public databases (e.g. Pfam, Rfam, PDB, UniProt and ENA etc.). Jalview has editing and annotation functionality within a fully integrated, multiple window interface. The sequence alignment programs Clustal Omega, Muscle, MAFFT, ProbCons, T-COFFEE, ClustalW, MSA Prob and GLProb can be run directly from within Jalview. Jalview integrates protein secondary structure prediction (JPred), generate trees, assesses consensus and conservation across sequence families. Journal quality figures can be generated from the results. The Jalview Desktop will run on Mac, MS Windows, Linux and any other platform that supports Java. It has been developed in Geoff Barton's group (www.compbio.dundee.ac.uk) in the School of Life Sciences (www.lifesci.dundee.ac.uk) at the University of Dundee with funding from the BBSRC and the Wellcome Trust. /system/content_providers/images/000/000/091/original/logo-boxg.png?1524735946