Chip-seq: Peak calling tutorial

The aim is to :

Understand how to process reads to obtain peaks (peak-calling).
Become familiar with differential analysis of peaks

In practice :

Obtain dataset from GEO
Analyze mapped reads
Obtain set(s) of peaks, handle replicates
Differential analysis of peak

Keywords: Chip-seq, NGS, Peak calling

Chip-seq: Peak calling tutorial https://tess.elixir-europe.org/materials/chip-seq-peak-calling-tutorial The aim is to : Understand how to process reads to obtain peaks (peak-calling). Become familiar with differential analysis of peaks In practice : Obtain dataset from GEO Analyze mapped reads Obtain set(s) of peaks, handle replicates Differential analysis of peak Chip-seq, NGS, Peak calling