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Pan genomics tutorial using Minima2 and seq-seq-pan
• beginnerpan genomics genome alignment Minimap2 alignment seq-seq-pan R visualization genome alignment -
PDF
Introduction to Machine Learning Algorithms
•• intermediateMachine learning -
Video
Introduction to Machine Learning Algorithms
•• intermediateMachine learning -
Video
Deep Learning using a Convolutional Neural Network
•• intermediateMachine learning -
Training materials
PLAZA is a plant-oriented online resource for comparative, evolutionary and functional genomics
•• intermediateGenotype and phenotype Phylogenomics Evolutionary biology Comparative genomics Functional genomics Plant biology Comparison Visualisation Annotation plants … -
Analysis of public microarray data using Genevestigator
Biomarkers Gene expression Expression analysis
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RNA-Seq analysis for differential expression in GenePattern
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Probabilistic programming with (R)Stan
Statistics and probability
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Analyzing biological networks with Ingenuity Pathway Analysis
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Data manipulation in OpenRefine
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Introductory session on programming with Bioperl
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Introduction to network biology
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Text mining and curation
Natural language processing Data curation and archival
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Custom training: Ingenuity Pathway Analysis
Metabolomics Protein interactions Proteomics Microarray experiment
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Custom training: OpenRefine
Data quality management
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Introduction to Biopython
Software engineering
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Comparative genomics in eukaryotes
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Presentation
Data security and encryption
Data security Data management data encryption
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Bioinformatics Summer School 2019
•• intermediateProteomics RNA-Seq Omics Statistics and probability Data handling -
Analysis of metabolome data
Metabolomics
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Initiation GIMP and Inkscape
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Video, Tutorial
galaxy.sciensano.be
• beginnerBioinformatics Public health and epidemiology Genomics Sequencing Microbiology -
Basic statistics in R, part II
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Scop3P
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Analysis of public microarray data sets
Expression data visualisation
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Advanced FlowJo training
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Gentle hands-on introduction to Perl programming
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Presentation, Vignette, Video
Research Data Management in Life Sciences
• beginnerData management -
hands-on tutorial
Introduction to Research Data Management
• beginnerData quality management Data curation and archival Research Data Management Research Publishing -
Mass spectrometry data processing
Proteomics
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Genomics Core KU Leuven/UZ Leuven
The Genomics Core is a facility that advances the development and implementation of novel genomic technologies. The facility provides technological and intellectual support for scientific applications as well as next generation genetic diagnosis.
The genomics core partners within the...0 events (1 past event)Genomics Core KU Leuven/UZ Leuven https://gc.uzleuven.be https://tess.elixir-europe.org/content_providers/genomics-core-ku-leuven-uz-leuven The Genomics Core is a facility that advances the development and implementation of novel genomic technologies. The facility provides technological and intellectual support for scientific applications as well as next generation genetic diagnosis. The genomics core partners within the Universitaire ziekenhuizen KULeuven to enable the BELAC-accredited breast cancer (BRCA) genetic test as well as non-invasive prenatal testing (NIPT). -
Flemish Supercomputer Centre
The Flemish Supercomputer Centre (VSC) is a virtual centre making supercomputer infrastructure available for both the academic and industrial world. This centre is managed by the Research Foundation - Flanders (FWO) in partnership with the five Flemish university associations.
0 events (66 past events)Flemish Supercomputer Centre https://www.vscentrum.be https://tess.elixir-europe.org/content_providers/flemish-supercomputer-centre The Flemish Supercomputer Centre (VSC) is a virtual centre making supercomputer infrastructure available for both the academic and industrial world. This centre is managed by the Research Foundation - Flanders (FWO) in partnership with the five Flemish university associations. /system/content_providers/images/000/000/067/original/logo_VSC_CMYK-1.png?1487672198 -
VIB Bioinformatics Core
Note: the materials from the VIB Bioinformtatics Core are no longer available since the service facility has been stopped.
More recent training material can be found via the provider VIB Training.
30 training materials0 events (201 past events)VIB Bioinformatics Core https://www.bits.vib.be/ https://tess.elixir-europe.org/content_providers/bitsvib Note: the materials from the VIB Bioinformtatics Core are no longer available since the service facility has been stopped. More recent training material can be found via the provider VIB Training. /system/content_providers/images/000/000/042/original/bioinformatics_core_cmyk_pos.jpg?1539150443 -
VIB Conferences
VIB is a life sciences research institute in Flanders, Belgium. More than 1470 scientists from over 66 countries perform basic research into the molecular foundations of life. The institute offers a program of international VIB conferences in various VIB research fields. From day one VIB has...
1 training material0 events (19 past events)VIB Conferences http://www.vibconferences.be/ https://tess.elixir-europe.org/content_providers/vib-conferences VIB is a life sciences research institute in Flanders, Belgium. More than 1470 scientists from over 66 countries perform basic research into the molecular foundations of life. The institute offers a program of international VIB conferences in various VIB research fields. From day one VIB has supported and sponsored scientific conferences to help VIB scientists network with their colleagues. In 2014 the VIB Conference Series was launched to further expand these activities and support them with a dedicated professional team. The aims of the conference series are: to showcase cutting edge research and exciting technological solutions presented by leading scientist in the life sciences fields to offer junior researchers the opportunity to present their work during poster sessions and learn from the world’s experts during the Meet the Expert sessions to establish opportunities for collaborations between scientists during an accompanying social program including lunches, conference dinners and receptions /system/content_providers/images/000/000/054/original/vib_conferences_series_rgb_pos.png?1538645378 -
UCLouvain Bioinformatics Platform
The platform's goak is to collaborate throughput the scientific community at the UCLouvain and offer technical and methodological bioinformatics support, including, among others:
support the bioinformatics aspects of grant proposals and experimental designs
high throughput omics data analysis...1 training material0 events (2 past events)UCLouvain Bioinformatics Platform https://uclouvain.be/en/research/bioinfo https://tess.elixir-europe.org/content_providers/uclouvain-bioinformatics-platform The platform's goak is to collaborate throughput the scientific community at the UCLouvain and offer technical and methodological bioinformatics support, including, among others: support the bioinformatics aspects of grant proposals and experimental designs high throughput omics data analysis such as genomics, epigenetics and transcriptomics (RNASeq or microarrays) or mass spectrometry based proteomics and metabolomics help in utilisation of public databases (TCGA, Gtex, CCLE, ENCODE, ...) development of dedicated algorithms and software. The platform also organises workshops in data analysis and bioinformatics to introduce particpants to widely used languages such as R, and get them started in the analysis of their own omics data. For additional information and any collaboration requests, please contact us by email at contact-cbio@uclouvain.be describing your needs, including, if data is already available, the underlying technology and experimental design. Members Prof Laurent Gatto Mr Theo Killian Dr Axelle Loriot Contact: contact-cbio@uclouvain.be CBIO - de Duve Institute - UCLouvain Avenue Hippocrate, 75 - bte B1.74.10 1200 Brussels, Belgium -
VIB Training & Conferences
VIB is a life sciences research institute in Flanders, Belgium. The institute is dedicated to showcasing its world-class research across all activities, including its training and conference initiatives. In addition, actively training scientists is one of VIB’s strategic objectives.
VIB...
37 training materials98 events (962 past events)VIB Training & Conferences https://www.vibtrainingandconferences.be https://tess.elixir-europe.org/content_providers/vib-training VIB is a life sciences research institute in Flanders, Belgium. The institute is dedicated to showcasing its world-class research across all activities, including its training and conference initiatives. In addition, actively training scientists is one of VIB’s strategic objectives. VIB Training & Conferences includes a top-notch, fully integrated program covering science, technology, transferable skills, leadership, career and personal growth. Next to being an excellent scientist, being a great people and project manager, having clear communication and presentation skills, and many other soft skills are equally important in one’s career. VIB Training & Conferences offering is designed to align with VIB’s vision and address the needs of the scientific community and research support staff. The program strives to achieve the highest quality standards through promoting curiosity, creativity, research integrity, and responsibility. The program aims to build a robust learning culture, improve skill imbalances and connect professionals in academia and industry. In doing so, VIB’s training and conference efforts contribute significantly to the economic and social advancement of Flanders and its global impact. /system/content_providers/images/000/000/649/original/vib_tagline_pos_rgb.png?1660915879
Activity log
Belgium