Training materials
Tools: BridgeDb API or COBREXA.jl or Cytoscape or DISEASES or ORGANISMS or PLAZA monocots or PathVisio or Wikidata
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Tutorial, hands-on tutorial
WikiPathways Academy
• beginnerBiology Systems biology Pathway WikiPathways Biocuration -
Tutorial
Tutorials on COBREXA
•• intermediatePersonalised medicine Simulation experiment Modelling and simulation cell-level simulations Biomodelling HPC -
Identifier mapping with Cytoscape
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Tutorial
Use Scholia and Wikidata to find scientific literature
• beginnerLiterature -
Training materials
PLAZA is a plant-oriented online resource for comparative, evolutionary and functional genomics
•• intermediateGenotype and phenotype Phylogenomics Evolutionary biology Comparative genomics Functional genomics Plant biology Comparison Visualisation Annotation plants Plants bioinformatics genomics Visualisation Annotation -
Tutorial
#metawinterschool contribution by BiGCaT
• beginnerMetabolomics Identifiers ELIXIR RIR, BridgeDb -
Tutorial, Vignette
BridgeDbR Tutorial
• beginnerELIXIR RIR, BridgeDb -
Text-mining exercises
•• intermediateMicrobial ecology Metagenomics Natural language processing Data mining -
STRING exercises
• beginnerBioinformatics Molecular interactions, pathways and networks Protein interactions -
Cytoscape stringApp exercises
•• intermediateBioinformatics Molecular interactions, pathways and networks Protein interactions Proteomics Data visualisation