Training materials
Tools: BioSimulations or Bioconductor or CellNOptR or Identifiers.org or RCy3 or omnipy
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Presentation
FAIRtracks and Omnipy – FAIRtracks interoperability story
•• intermediateData submission, annotation, and curation Data identity and mapping Data quality management Data governance Workflows Data handling -
Tutorial
From transcriptomics to mechanistic models of signalling
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Tutorial
Tutorial on CellNOpt
•• intermediatePersonalised medicine Simulation experiment Molecular interactions, pathways and networks Transcription factors and regulatory sites Modelling and simulation HPC Biomodelling Signalling -
Identifier mapping with Cytoscape
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Documentation
BioSimulations tutorial and help
•• intermediateComputational biology Systems biology Simulation experiment Visualisation Modelling and simulation SystemsBiology ComputationalBiology Computational modelling Modeling Biomodelling Model Kinetic modeling SED-ML COMBINE -
Liftr & sbgr
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Talk
Discussion: Guidelines for submitting data to ExperimentHub
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Talk
HCA Data Access
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Talk
Single cell updates
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Talk
Pitfalls and best practices for serializing Bioconductor objects