Training materials
Status: Active
and Scientific topics: Protein structure analysis or Proteins or Software engineering or Workflows
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Slides
Navigating Licensing in Bioinformatics: Software and Data Perspectives
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Tutorial
Tutorial on using existing PerMedCoE Building Blocks and workflows
•• intermediateBioinformatics Workflows Personalised medicine Building blocks -
Learning pathway
Version control with Git
•• intermediateSoftware engineering Open science Version control -
lessons, e-learning
Introduction to Data Management Practices - Versioning of data and code using Git
• beginnerData management FAIR data Software engineering RStudio CONVERGE README -
course materials, Online material, Training materials
Cloud-SPAN Genomics
• beginnerBioinformatics Software engineering Genomics DNA polymorphism Workflows Data architecture, analysis and design Shell Command line Cloud computing HPC Data analysis High performance computing -
e-learning
neXtProt : Exploring human proteins
• beginnerProteins Proteomics Proteins (proteins) human -
course materials, online course, Training materials
Cloud-SPAN Prenomics
• beginnerBioinformatics Software engineering Genomics Query and retrieval Data handling Cloud computing Shell Command line Amazon Web Services genomics HPC Data analysis bioinformatics -
Slideshow, Training materials
Prediction of protein structures and complexes with AlphaFold on the HPC
•• intermediateProtein structure analysis Machine learning Structure prediction Structure visualisation Multiple sequence alignment AlphaFold Database (13181) -
WEBINAR: bio.tools - making it easier to find, understand and cite biological tools and software
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Presentation, course materials
Introduction to Nextflow workshop
• beginnerWorkflows Nextflow DSL2
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