Training materials
Related resources: Introduction to Galaxy dataset or MGnify or Metagenomics dataset or Slides | Beacon v2: a discovery tool for genomi... or User Interface and Features dataset or Variant Analysis dataset
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Video, Presentation
Introduction to the EGA and its Ecosystem of Tools
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Slides, course materials, hands-on tutorial
Organisation and utilisation of hologenomic datasets – course notes
•• intermediateMetatranscriptomics Sample collections Metabolomics Metagenomics hologenomics metagenomics MGnify Workshop -
Tutorial
User Interface and Features - Jupyter: Use Jupyter notebooks in Galaxy
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Tutorial
Variant Analysis - Mapping and molecular identification of phenotype-causing mutations
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Tutorial
Variant Analysis - Microbial Variant Calling
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Tutorial
Variant Analysis - Calling variants in non-diploid systems
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Tutorial
Variant Analysis - Exome sequencing data analysis
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Tutorial
Introduction to Galaxy Analyses - From peaks to genes
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Tutorial
Metagenomics - Analyses of metagenomics data - The global picture
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Tutorial
Metagenomics - 16S Microbial Analysis with Mothur