Training materials
Related resources: Epigenetics dataset or GEEM or RCN Open data policy or Ready For BioData Management? or Slides | GPAP: the RD-Connect Genome-Phenome An... or Workshop FAIR & Data stewardship for the 2020 I... or seq-seq-pan
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Pan genomics tutorial using Minima2 and seq-seq-pan
• beginnerpan genomics genome alignment Minimap2 alignment seq-seq-pan R visualization genome alignment -
Video, Presentation
Introduction to the EGA and its Ecosystem of Tools
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Slidedeck
Workshop FAIR & Data stewardship for the 2021 ITN ProEVLifeCycle
• beginnerData management FAIR data Data handling Analysis Data analysis Data management planning Data processing Data sharing Data collection Data preserving Data reuse -
Slides
Data Management Planning workshop for new Life Science Projects
• beginnerData management Deposition Data handling Data retrieval data management plan NeLS TSD metadata sensitive data publication data protection storage identifiers DMP licensing Compliance data life cycle - collect data life cycle - reuse data life cycle - analyse data life cycle - process data life cycle - preserve data life cycle - share data life cycle - plan -
Training materials
Plant Phenotyping Data managment (MIAPPE)
• beginnerPhenomics Plant biology Data management Annotation Formatting Plant Phenotyping Data-format data sharing -
Video
Annotating data using ontologies
• beginnerData management Data integration and warehousing Ontology and terminology Ontologies Annotation Data integration -
Tutorial
Epigenetics - Hi-C analysis of Drosophila melanogaster cells using HiCExplorer
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Tutorial
Epigenetics - DNA Methylation data analysis