Training materials
Related resources: ChIP-Seq data analysis dataset or GPAP: the RD-Connect Genome-Phenome Analysis Pl... or OpenRefine or Sequence analysis dataset or Transcriptomics slides or User Interface and Features dataset or Workshop FAIR & Data stewardship for the 2020 I...
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lessons, e-learning
Introduction to Data Management Practices - Cleaning tabular data with OpenRefine
• beginnerData management Open science FAIR data FAIR CONVERGE -
Video, Presentation
Introduction to the EGA and its Ecosystem of Tools
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Slidedeck
Workshop FAIR & Data stewardship for the 2021 ITN ProEVLifeCycle
• beginnerData management FAIR data Data handling Analysis Data analysis Data management planning Data processing Data sharing Data collection Data preserving Data reuse -
Tutorial
User Interface and Features - Jupyter: Use Jupyter notebooks in Galaxy
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Tutorial
ChIP-Seq data analysis - Identification of the binding sites of the Estrogen receptor
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Tutorial
Transcriptomics - Visualization of RNA-Seq results with CummeRbund
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Tutorial
ChIP-Seq data analysis - Identification of the binding sites of the T-cell acute lymphocytic leukemia protein 1 (TAL1)
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Tutorial
Sequence analysis - RAD-Seq to construct genetic maps
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Tutorial
Sequence analysis - RAD-Seq de-novo data analysis
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Tutorial
Sequence analysis - RAD-Seq Reference-based data analysis
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