Training materials
Related resources: COBRA Toolbox or CanCOGeN or MetaboLights or Metagenomics dataset or Proteomics dataset or Slides | Beacon v2: a discovery tool for genomi...
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Video, Presentation
Introduction to the EGA and its Ecosystem of Tools
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Slides, course materials, hands-on tutorial
Organisation and utilisation of hologenomic datasets – course notes
•• intermediateMetatranscriptomics Sample collections Metabolomics Metagenomics hologenomics metagenomics MGnify Workshop -
Video
Applying data standards to the harmonization of COVID-19 datasets from different sources
• beginnerData integration and warehousing Data integration Standards Standardised vocabulary data harmonization Ontologies -
Tutorial
Constraint-based reconstruction and analysis toolbox tutorials
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Tutorial
Proteomics - Peptide and Protein ID using OpenMS tools
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Tutorial
Metagenomics - Analyses of metagenomics data - The global picture
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Tutorial
Metagenomics - 16S Microbial Analysis with Mothur
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Tutorial
Proteomics - Peptide and Protein Quantification via Stable Isotope Labelling (SIL)
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Tutorial
Proteomics - Peptide and Protein ID using SearchGUI and PeptideShaker
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Tutorial
Proteomics - Secretome Prediction
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