Training materials
Related resources: Associated slides or GitHub or MetaboLights or Next generation biobanking ontology (NGBO) or Workshop FAIR & Data stewardship for the 2020 I...
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lessons, e-learning
Introduction to Data Management Practices - Versioning of data and code using Git
• beginnerData management FAIR data Software engineering RStudio CONVERGE README -
Slides, course materials, hands-on tutorial
Organisation and utilisation of hologenomic datasets – course notes
•• intermediateMetatranscriptomics Sample collections Metabolomics Metagenomics hologenomics metagenomics MGnify Workshop -
Slidedeck
Workshop FAIR & Data stewardship for the 2021 ITN ProEVLifeCycle
• beginnerData management FAIR data Data handling Analysis Data analysis Data management planning Data processing Data sharing Data collection Data preserving Data reuse -
Video
Annotating data using next generation biobanking ontology (NGBO)
• beginnerData integration and warehousing Ontology and terminology Standards Ontologies Data Integration data harmonization Standardised vocabulary -
Tutorial
Assembly - Unicycler Assembly
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Tutorial
Transcriptomics - Visualization of RNA-Seq results with CummeRbund
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Tutorial
Development in Galaxy - Visualizations: generic plugins
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Tutorial
Development in Galaxy - Galaxy Webhooks
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Tutorial
Development in Galaxy - Visualizations: charts plugins
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Tutorial
Assembly - De Bruijn Graph Assembly
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